Gene CPF_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1661 
Symbol 
ID4202254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1877319 
End bp1877897 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content31% 
IMG OID638082536 
Productflavoredoxin 
Protein accessionYP_696100 
Protein GI110800624 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.600705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TTAATTTTAA GGGAAGTGTA ATGTTAAATC CTACTCCAGT AGTTCTTGTT 
ACTTCTAAAA ATAAAGAAGA TAAAGTAAAT GCTTTTACTG TTGGTTGGGT TAGCACAGTT
TGCACTAAAC CTCCAATGAT CGCCATGGGA ATAAGACCGG AAAGATTATC CCATGAATAT
ATAAAAGAAA GCAAGGAATG TGTTATAAAC TTACCATGTA GAGATATGGT TAAATTTGTT
GATTTTTGCG GTGTAAAATC TGGAAGAAAA GTTGACAAAA TTAAACACTT TGGATATGCC
CTTGATAAAG GAATAGCTGT AAGTACTCCT TCTATTGAAA AAGCACCTGT AGCTTTAGAA
TGTAAGCTTA AATCTATAAC ACCTTTAGGT ACACATGACA TGTTTTTATT TGAGGTTCTT
AATGTAAAGG TTGATGAAAG TCTTATAGAT GAAAAGGGAA AGATTCATTT TAATAAGGCT
AATTTATTAG CATATAGTCA TGGAGAATAT TTTGGTCTTA ATTCTAAACC ACTAGGTTCT
TTTGGTTATT CAATTAAGAA AAAGAAAAAA TCAAGATAG
 
Protein sequence
MKKVNFKGSV MLNPTPVVLV TSKNKEDKVN AFTVGWVSTV CTKPPMIAMG IRPERLSHEY 
IKESKECVIN LPCRDMVKFV DFCGVKSGRK VDKIKHFGYA LDKGIAVSTP SIEKAPVALE
CKLKSITPLG THDMFLFEVL NVKVDESLID EKGKIHFNKA NLLAYSHGEY FGLNSKPLGS
FGYSIKKKKK SR