Gene CPF_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1648 
Symboltig 
ID4202975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1863279 
End bp1864565 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content32% 
IMG OID638082525 
Producttrigger factor 
Protein accessionYP_696089 
Protein GI110800198 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.56288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCTA AAATGAACAA AATAGACACA AATGTTGTAG AATTAGAAAT TAAAGTTGAT 
GCTAAGGACT TTAACGAGGC GTTAAAAAAG TCTTATAATA AAAACTCAAA GAAGTTTAAC
ATACCAGGAT TCAGAAAAGG AAAAGTTCCA ATGAACATGG TTAAAAAATT CTACGGAGTT
GAAGTTTTAT TTGATGATGC AATAAACGCT TGTATAGATA AAACTTACGG AGTTGCTTTA
GAAGAAAACA ACGTAAGACC AGTTGATTAT CCACAAATCG AAGTAGTAGA AGTTGGAGAA
GGAAAAGACT TAGTTTACAA AGCTAAAGTT ACTACTTACC CAGAAGTTAC TTTAGGAGAT
TACAAAGGAT TAGAAGTTGA AGAAGTATCT TACGAAGTAA AAGAAGAAGA CATAGAAAAA
CAATTAGCTG ATATGCAAGC AAGAAATGCT AGAGTTGAAA CTAAAGAAGA AGGAACAGTT
GAAAATGGAA ACATAGCTGT TATAGACTTC AAAGGATTCA TAGATGACGT AGCATTCGAA
GGTGGAGAAG GAAAAGATTA TCCATTAGAA ATAGGTTCAG GAAGCTTCAT AGATAACTTT
GAAGAGCAAT TAGTTGGATT AAAAGTTGGA GAAAGCAAAG ATGTTAACGT AACATTCCCA
GAAGCTTATG GAAAAGAAGA CTTAAACGGA AAACCAGCTA AATTCGAAGT AACTGTAAAA
GAAATAAAAG TTAAAGAATT ACCAGCTTTA GATGATGAGT TTGCTAAAGA AGTTTCAGAA
TTTGATACTT TAGAAGAATT AAAAGCTGAC TTAAAAGAAA AAGCTGTAAA AGCTAACGAA
TTAAGAGCTA AAAGAGAAAT GGAAGAAAAA GTTATAAACG CTGTAGTTGA TAACGCAAAA
GTAGAAATTC CAGAAGCTAT GATAAACAGA GAAGTTGAAA ACATGGTAAG AGACTTAGAA
ATGAGATTAG GACAACAAGG ACTAAGCTTA GAGCAATACT ATGAGTTCAC TGGAAGCACT
GAAGATAAGA TGAAATCTTA CATGAAAGAA AATGCTGAAA GAAAAGTAAA AACTGATTTA
GTTATGAGTG CTGTAACTGA AGCAGAAGCT ATAGAAGCTA CTGAAGAAGA ATTAAAAGCA
AAAGCAGAAG AAGTTGCTAA AATGTACTCA AACGGAGCAG AAACTGAGAA AATGGTTGAT
CTATTATTAA ATGCTCAAAG AGCTGCTTTA GAGTTAGATG TTAAGAGAGA AAAAACTTTA
AAAATGTTAT TTGAATCTTT AAAATAA
 
Protein sequence
MEAKMNKIDT NVVELEIKVD AKDFNEALKK SYNKNSKKFN IPGFRKGKVP MNMVKKFYGV 
EVLFDDAINA CIDKTYGVAL EENNVRPVDY PQIEVVEVGE GKDLVYKAKV TTYPEVTLGD
YKGLEVEEVS YEVKEEDIEK QLADMQARNA RVETKEEGTV ENGNIAVIDF KGFIDDVAFE
GGEGKDYPLE IGSGSFIDNF EEQLVGLKVG ESKDVNVTFP EAYGKEDLNG KPAKFEVTVK
EIKVKELPAL DDEFAKEVSE FDTLEELKAD LKEKAVKANE LRAKREMEEK VINAVVDNAK
VEIPEAMINR EVENMVRDLE MRLGQQGLSL EQYYEFTGST EDKMKSYMKE NAERKVKTDL
VMSAVTEAEA IEATEEELKA KAEEVAKMYS NGAETEKMVD LLLNAQRAAL ELDVKREKTL
KMLFESLK