Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1648 |
Symbol | tig |
ID | 4202975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1863279 |
End bp | 1864565 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082525 |
Product | trigger factor |
Protein accession | YP_696089 |
Protein GI | 110800198 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.56288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCTA AAATGAACAA AATAGACACA AATGTTGTAG AATTAGAAAT TAAAGTTGAT GCTAAGGACT TTAACGAGGC GTTAAAAAAG TCTTATAATA AAAACTCAAA GAAGTTTAAC ATACCAGGAT TCAGAAAAGG AAAAGTTCCA ATGAACATGG TTAAAAAATT CTACGGAGTT GAAGTTTTAT TTGATGATGC AATAAACGCT TGTATAGATA AAACTTACGG AGTTGCTTTA GAAGAAAACA ACGTAAGACC AGTTGATTAT CCACAAATCG AAGTAGTAGA AGTTGGAGAA GGAAAAGACT TAGTTTACAA AGCTAAAGTT ACTACTTACC CAGAAGTTAC TTTAGGAGAT TACAAAGGAT TAGAAGTTGA AGAAGTATCT TACGAAGTAA AAGAAGAAGA CATAGAAAAA CAATTAGCTG ATATGCAAGC AAGAAATGCT AGAGTTGAAA CTAAAGAAGA AGGAACAGTT GAAAATGGAA ACATAGCTGT TATAGACTTC AAAGGATTCA TAGATGACGT AGCATTCGAA GGTGGAGAAG GAAAAGATTA TCCATTAGAA ATAGGTTCAG GAAGCTTCAT AGATAACTTT GAAGAGCAAT TAGTTGGATT AAAAGTTGGA GAAAGCAAAG ATGTTAACGT AACATTCCCA GAAGCTTATG GAAAAGAAGA CTTAAACGGA AAACCAGCTA AATTCGAAGT AACTGTAAAA GAAATAAAAG TTAAAGAATT ACCAGCTTTA GATGATGAGT TTGCTAAAGA AGTTTCAGAA TTTGATACTT TAGAAGAATT AAAAGCTGAC TTAAAAGAAA AAGCTGTAAA AGCTAACGAA TTAAGAGCTA AAAGAGAAAT GGAAGAAAAA GTTATAAACG CTGTAGTTGA TAACGCAAAA GTAGAAATTC CAGAAGCTAT GATAAACAGA GAAGTTGAAA ACATGGTAAG AGACTTAGAA ATGAGATTAG GACAACAAGG ACTAAGCTTA GAGCAATACT ATGAGTTCAC TGGAAGCACT GAAGATAAGA TGAAATCTTA CATGAAAGAA AATGCTGAAA GAAAAGTAAA AACTGATTTA GTTATGAGTG CTGTAACTGA AGCAGAAGCT ATAGAAGCTA CTGAAGAAGA ATTAAAAGCA AAAGCAGAAG AAGTTGCTAA AATGTACTCA AACGGAGCAG AAACTGAGAA AATGGTTGAT CTATTATTAA ATGCTCAAAG AGCTGCTTTA GAGTTAGATG TTAAGAGAGA AAAAACTTTA AAAATGTTAT TTGAATCTTT AAAATAA
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Protein sequence | MEAKMNKIDT NVVELEIKVD AKDFNEALKK SYNKNSKKFN IPGFRKGKVP MNMVKKFYGV EVLFDDAINA CIDKTYGVAL EENNVRPVDY PQIEVVEVGE GKDLVYKAKV TTYPEVTLGD YKGLEVEEVS YEVKEEDIEK QLADMQARNA RVETKEEGTV ENGNIAVIDF KGFIDDVAFE GGEGKDYPLE IGSGSFIDNF EEQLVGLKVG ESKDVNVTFP EAYGKEDLNG KPAKFEVTVK EIKVKELPAL DDEFAKEVSE FDTLEELKAD LKEKAVKANE LRAKREMEEK VINAVVDNAK VEIPEAMINR EVENMVRDLE MRLGQQGLSL EQYYEFTGST EDKMKSYMKE NAERKVKTDL VMSAVTEAEA IEATEEELKA KAEEVAKMYS NGAETEKMVD LLLNAQRAAL ELDVKREKTL KMLFESLK
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