| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1646 |
|---|
| Symbol | clpX |
|---|
| ID | 4201971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1861157 |
|---|
| End bp | 1862464 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638082523 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_696087 |
|---|
| Protein GI | 110800496 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAT TTGAAGACAA AAAGCAATTA AGATGTTCTT TTTGTGGTAA AAATCAGGAA
CAGGTTAAGA GATTAATCGC AGGTCCTGGT GTATATATAT GTGATGAATG TATAGAGCTT
TGTTCAGAAA TAATAGAAGA TGAATTTGAA GGAAATACAG AATCATCACC ATTAGAAGCT
AGCAATCTTC CAAAGCCACA AGAAATCAAA GACTATTTAG ATCAATATGT TGTTGGTCAA
GATAGAGCTA AGAAATCTTT AGCAGTAGCT GTTTATAATC ATTACAAGAG AATAAATGCT
AATAAGGCAG AGGATGATGT TGAATTACAA AAAAGTAACA TACTTTTATT AGGACCTACA
GGTTCAGGTA AGACATTACT TGCGCAAACA CTTGCTAAAA TGTTAAATGT TCCATTTGCT
ATAGCAGATG CTACAACATT AACAGAGGCA GGATATGTTG GTGAAGATGT TGAAAATATA
CTTTTAAAGC TAATTCAAAA TGCAGATTAT GATGTTGAAA GAGCTGAAAA AGGTATAATA
TATATAGATG AGATAGATAA GATTGCTAGA AAATCAGAAA ATCCATCTAT TACAAGAGAT
GTTTCTGGAG AGGGTGTTCA ACAAGCCTTA TTAAAAATAT TAGAGGGAAC AACAGCTTCA
GTACCACCAC AAGGTGGAAG AAAGCATCCA CATCAAGAGT TTATACAAAT TAATACTTCA
AATATTTTAT TTATTTGTGG TGGAGCTTTT GATGGAATAG ATAAAATAAT AGAAAAAAGA
GGAACTAAGA GTTCTATAGG TTTTGGCGCT GAGGTTAAAG GAAAAAGCGA AAAGAACGTT
GGAGAACTTT TAAAGGATAT AATGCCTGGG GATTTATTAA AATTTGGTTT AATACCAGAA
TTTGTTGGTA GATTACCAGT ATTAGTAACT TTAGAAGCTT TAGATAACGA AGCTTTAGTA
AGTATTTTAA CTAAGCCAAA GAATGCTCTA GTAAAACAAT ACAAAAAGTT ATTTGAGCTT
GATAATGTAA AACTAGATTT TACAGAGGAA GCTTTAAAAG CTATTGCAGA TGAAGCTATA
AATAGAAAAA CTGGTGCTAG AGGATTAAGA GCTATAGTAG AAGAAACTAT GATGGATATA
ATGTTTGATA TACCATCAGA AGAGAATATT GTAAAAGCTA CTATAACTGA AGAGACAATA
AAAGATAGAA AAGATCCAGA GCTTGAAAAG CTTCCAGAAG GAGAAGTTAG ACCAACTTTA
AAAACTGAGA AGAAAAATAA AGCTAGAAAA GATATAGAAA CTGCTTAA
|
|---|
| Protein sequence | MGKFEDKKQL RCSFCGKNQE QVKRLIAGPG VYICDECIEL CSEIIEDEFE GNTESSPLEA
SNLPKPQEIK DYLDQYVVGQ DRAKKSLAVA VYNHYKRINA NKAEDDVELQ KSNILLLGPT
GSGKTLLAQT LAKMLNVPFA IADATTLTEA GYVGEDVENI LLKLIQNADY DVERAEKGII
YIDEIDKIAR KSENPSITRD VSGEGVQQAL LKILEGTTAS VPPQGGRKHP HQEFIQINTS
NILFICGGAF DGIDKIIEKR GTKSSIGFGA EVKGKSEKNV GELLKDIMPG DLLKFGLIPE
FVGRLPVLVT LEALDNEALV SILTKPKNAL VKQYKKLFEL DNVKLDFTEE ALKAIADEAI
NRKTGARGLR AIVEETMMDI MFDIPSEENI VKATITEETI KDRKDPELEK LPEGEVRPTL
KTEKKNKARK DIETA
|
|---|
| |