| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1625 |
|---|
| Symbol | |
|---|
| ID | 4203654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1843198 |
|---|
| End bp | 1844493 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638082503 |
|---|
| Product | phosphodiesterase/nucleotide pyrophosphatase family protein |
|---|
| Protein accession | YP_696068 |
|---|
| Protein GI | 110799756 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.018842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATTA AAATGAATAA TAAATACATG GTGGTAATTT CTTTAGATGC AGTATCTTCA
AAAGATATTG AAATAATGAA GGAGTTACCT AATATATCTA AGCTAATGAA AGAAGGGTCA
CTTATAAAAA ATGTAGAAAC AATATATCCT TCTTTGACAT ATCCAGCTCA TGTATCCATT
ATTACTGGGA AATATCCAGT TAATCATGGA ATAACAAATA ATATAGTATT AAATTTTAAG
GATGAAAATC CAAATTGGAA CTGGTACGGA AATAAAATAA AGGGAGAAAC TCTTTTTGGA
CTAGCTAAGA AAAATGGTCT TACAACGGCT TCAGTGGTTT GGCCAGTTAC AGGAAAAATG
AAAATAGATT ATAATATGCC AGAAATATTT GAGACAAAAC CTTGGCATAA TCAAATAATT
ATGTCTGCTT TAGCTGGAAG TAAAGTTTAT CAATTTAGTA TGAATAAAAA GTTTGGTTCT
CTTAGAAAAG GTACAAAAGA ACCTTATTTA GATAATTTTG TTACAGCATG TGCTAAGGAG
ACAATAAAAA AATACAAGCC TAATTTAACT ATGGTCCATC TAATAGATGT GGATTCTCAT
AGACATGATT ATGGATATGA AAGTTTAGAA GCTTTAGAAG CTTTAAAAAG ACACGATATT
AGAGTAGGAG AGATAATACA GTGTTTAAAA GAGGCAGGGA TATATGAAAA CACAACATTG
ATTTTACTAG GAGACCATAG TGCAATAGAT ACTCATAAGG TAATAAGGCT TAATAGTGCC
TTTAGGGAAG AAGGATTAAT AGAATTAAAG GATGGAAAGC TTAAAAGCTT TAAAGCAATA
GCTAGGGAAT GTGGAGGCTC ATGTTATATT TATTTAGATA ATAAAAATAA AGAAGATGAG
AAGAAATGTT TAGAGATCTT GAAAAAGCTT AAGGAAGAAG GAGCTTTAGA ATACATATTA
AATAAGGAAG AGGCCATAAA AGTTGGAGCT AATGATCAAT GTGATTTTAT GGTAGAAGCT
ACTAGAGGAT ATTATTTTTC AAATGAATAT GAAGGAAAAG TTATTGAGGA AACTAAAGAT
ATAAAAAATA AACATACTTA CAAAGCAGTT CATGGATATT CACCTAGAAA AAAAGATTAT
GGAACATTCT TTTTAGCTTT TGGAAGAGGA ATAAAATCAG GTGTTGTTTT AGAGGAAGGT
AAGCTTATAA ATCATGGACC AACCTTAGGA AGAATATTAG GTTTTAATTT TCAAAAGGCA
GATGGAATAG TTGAAGAGAG GATATTGAAT CTGTAA
|
|---|
| Protein sequence | MIIKMNNKYM VVISLDAVSS KDIEIMKELP NISKLMKEGS LIKNVETIYP SLTYPAHVSI
ITGKYPVNHG ITNNIVLNFK DENPNWNWYG NKIKGETLFG LAKKNGLTTA SVVWPVTGKM
KIDYNMPEIF ETKPWHNQII MSALAGSKVY QFSMNKKFGS LRKGTKEPYL DNFVTACAKE
TIKKYKPNLT MVHLIDVDSH RHDYGYESLE ALEALKRHDI RVGEIIQCLK EAGIYENTTL
ILLGDHSAID THKVIRLNSA FREEGLIELK DGKLKSFKAI ARECGGSCYI YLDNKNKEDE
KKCLEILKKL KEEGALEYIL NKEEAIKVGA NDQCDFMVEA TRGYYFSNEY EGKVIEETKD
IKNKHTYKAV HGYSPRKKDY GTFFLAFGRG IKSGVVLEEG KLINHGPTLG RILGFNFQKA
DGIVEERILN L
|
|---|
| |