Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1617 |
Symbol | |
ID | 4203641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1829551 |
End bp | 1830699 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082495 |
Product | YbiE/YbiF family membrane protein |
Protein accession | YP_696060 |
Protein GI | 110799376 |
COG category | [S] Function unknown |
COG ID | [COG5438] Predicted multitransmembrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0997624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA GTAAAAAGAG TATTATTTTT ATTATAAGTA CAGTTTTAAT ATCTTTTTTA ATTATAGGAT TTTCAAGATT TATATTTGAT AATGGCTTTA TGAAGGATAG ACTAAATAAA AATGTGCAAT ATTATGAAGG AAAAGTAAAG AGAATAACTA AAGAGATGTT AGAAGGAGAT AAATACATAG AGGGTATAGA GCTAGGATAT CAAAATATAG TCATAGAAAT TTTAGAGGGA CCAGAAAAGG GGAAGGAATA TGAAATCGTA AATAATATTA GCAGAATATA CAATATGCCA GTTGAGGAAG ATACTAAAGT AATTCTAGGT TTCTTTTATG AGAAGGATGA AATAAAAGAT ATAGCTGTTT ATAGTTATAA AAGAAGTAAC ATAATATTTT TGCTAGTACT ATTATTTGTA ATAGTCATAA TTGGAGTAGG TGGAGTAAAG GGAATAAAAT CATTAGTTTC ACTGTTTTTT ACTTGTGTTT GTATAATATT TTTAATGATT CCACTAATGT TAAGAGGGGT AAATCCAATA TTAGCAGCAA TTTTTTCAGC GCTTATAAGT ATTATTGTTA CATTGGTTTT AGTTTCTGGA ATAAATAAAA AAACTTTTAC TGCTATTTTA GGAACCTTAA GTGGAATAAT TATATCAGGA GTAATAGCAA TAAGTTTTGG AAAACTTGCA AATTTATCAG GTATTAGTAT GGAAGAAGCT GAAAGTATGA TGTATATAGC TGAAAATACC TCCTTAAATA TTCATGGAAT AATGTTTGCA GCTATATTAA TAGCATCTTT AGGAGCAGTT ATGGATGTTG CTATGTCTAT TTCCTCATCA ATTTTTGAAA TAAATGATAT TAATGATACT TTAAATAAAA GGGGATTATT TAAAAGTGGA ATGAATATAG GAAAGGATAT AATAGGAACA ATGGCTAATA CATTAATATT AGCTTTTGCT GGAGGGTCCT TAAATACAAT AATAATGTTA TATGCTTCTA ATATGAGTAA AAATCAAATA TTAAATTTAG ATGTGCTTTG TATAGAAGTT ATACAAGGCC TTGCAGGCAG CATAGGAATT ATACTTACAG TGCCAATAAC AGCTTTTATA GCAAGTTATT TTTGTAAGTT GAATTTAAAA AAAGTGTAA
|
Protein sequence | MKNSKKSIIF IISTVLISFL IIGFSRFIFD NGFMKDRLNK NVQYYEGKVK RITKEMLEGD KYIEGIELGY QNIVIEILEG PEKGKEYEIV NNISRIYNMP VEEDTKVILG FFYEKDEIKD IAVYSYKRSN IIFLLVLLFV IVIIGVGGVK GIKSLVSLFF TCVCIIFLMI PLMLRGVNPI LAAIFSALIS IIVTLVLVSG INKKTFTAIL GTLSGIIISG VIAISFGKLA NLSGISMEEA ESMMYIAENT SLNIHGIMFA AILIASLGAV MDVAMSISSS IFEINDINDT LNKRGLFKSG MNIGKDIIGT MANTLILAFA GGSLNTIIML YASNMSKNQI LNLDVLCIEV IQGLAGSIGI ILTVPITAFI ASYFCKLNLK KV
|
| |