Gene CPF_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1566 
Symbol 
ID4202158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1784095 
End bp1784580 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content30% 
IMG OID638082444 
ProductybaK/ebsC protein 
Protein accessionYP_696009 
Protein GI110800316 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0327966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG ATAAGAAGCT TAAGACAAAT GCTATGAGAA TATTAGATTC TAAAAAGGTT 
TCATATGAAA TGTTAAGTTA TGAAAGTGAA GATGGAAAGA TAGATGGGAT TTCAGTAGCT 
CATAAAATTG GAGTAGATGA GAAAAATGTA TTTAAAACAT TAGTAGCTCA AGGAACAAGC 
AAAGAGTTAT ATGTTTTTGT TATACCAGTT GCAGAAGAAT TAAATTTAAA GAATGCTGCT 
AAGATAGCTG GAGAAAAGAA AGTTGAAATG ATAGCAGTTA AGGATATATT AAAATACACT 
GGTTATATTC GTGGTGGATG TTCCCCTATC GGTTTAAAAC GTGATTACAG AACATTTATA 
CATGAGAGTG CTAAAGGCTT AGATTTCATG ATAGTAAGTG CAGGAAAGAT AGGACATCAA 
ATAAAATTAA ATCCCAATGA CTTAGTAGAA GTAGTATCTG GTAAATTTGA AAATCTAATA 
AAATAG
 
Protein sequence
MAKDKKLKTN AMRILDSKKV SYEMLSYESE DGKIDGISVA HKIGVDEKNV FKTLVAQGTS 
KELYVFVIPV AEELNLKNAA KIAGEKKVEM IAVKDILKYT GYIRGGCSPI GLKRDYRTFI 
HESAKGLDFM IVSAGKIGHQ IKLNPNDLVE VVSGKFENLI K