Gene CPF_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1557 
Symbolfba 
ID4200986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1777354 
End bp1778220 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content36% 
IMG OID638082435 
Productfructose-1,6-bisphosphate aldolase, class II 
Protein accessionYP_696000 
Protein GI110798922 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01859] fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.669513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAG TTAACGCAAA AGAAATGTTA AATAAAGCAA GAGAAGGAAA ATACGCTGTT 
GGTCAATTCA ACATAAACAA CTTAGAATGG ACAAAAGCTA TATTATTAAC TGCTCAAGAA
AATAACTCAC CAGTTATATT AGGAGTATCA GAAGGTGCTG CTAAATACAT GTGTGGATTC
AAAACAATAG TTGGAATGGT TAACGGAATG TTAGAAGAAT TAAAAATAAC TGTTCCTGTA
GCATTACACT TAGATCACGG TAGCTACCAA GGAGCTATAG ATGCTATGGA TGCTGGATTC
TCATCAGTAA TGTTCGATGG ATCACACTAC TCAATCGAAG AAAACATAGT TAAAACTAAA
GAAATAATCA ACTTAGCTGC TGCTAAAAAC GTATCAGTTG AAGCTGAAGT TGGATCAATC
GGTGGAGAAG AAGACGGTGT TGTTGGAGCT GGTGAAATCG CTGATCCTGC TGAATGTAAA
CAAATCGCTG AATTAGGAGT TACTATGTTA GCTGCTGGTA TCGGAAACAT TCACGGAAAA
TACCCTGCAA ACTGGGCTGG ATTAAACTTC GAAGCTTTAG CTAACATTAA AGCTGCTACT
GGAGATATGC CTTTAGTATT ACACGGTGGT ACTGGAATCC CTTCAGATAT GATCGCAGAA
GCTATATCAT TAGGAGTATC AAAAATAAAT GTTAATACTG AGTGTCAATT ATCATTTGCT
GAAGCTACTC GTAAATATAT AGAAGCTGGA AAAGACTTAG AAGGAAAAGG ATTTGACCCA
AGAAAATTAT TAAATCCTGG ATTCGAAGCT ATAAAAGCTA CAGTTAAAGA AAAAATGGAA
TTATTCGGTT CAGTAAACAG AGCTTAA
 
Protein sequence
MALVNAKEML NKAREGKYAV GQFNINNLEW TKAILLTAQE NNSPVILGVS EGAAKYMCGF 
KTIVGMVNGM LEELKITVPV ALHLDHGSYQ GAIDAMDAGF SSVMFDGSHY SIEENIVKTK
EIINLAAAKN VSVEAEVGSI GGEEDGVVGA GEIADPAECK QIAELGVTML AAGIGNIHGK
YPANWAGLNF EALANIKAAT GDMPLVLHGG TGIPSDMIAE AISLGVSKIN VNTECQLSFA
EATRKYIEAG KDLEGKGFDP RKLLNPGFEA IKATVKEKME LFGSVNRA