| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1548 |
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| Symbol | |
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| ID | 4202288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1766395 |
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| End bp | 1767459 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638082426 |
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| Product | putative galactoside ABC transporter, galactoside-binding protein |
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| Protein accession | YP_695991 |
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| Protein GI | 110800969 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00850993 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAGGTTTAGC ACTAATTTTA ATTTCAGCTT TAACTATGGG TACTTTAGTT
GGTTGTGGTG GAGGTTCAGG CTCTACTGGA TCATCTGGTG ATACACCAAA AGAAAACGAT
TCACCTAAGA TAGGAGCTAC AATTTATAGT TTTGAAGATA ACTTCATGTC ATACCAACGT
AGAAATATAG AAAAACTTTG TAATGGAAAA GCCGAGTTAT TAATGAATGA CTCTCAAAAT
AATCAATCTA AGCAAATAGA ACAAGTAGAC ACTATGATAG CTAAGGGTGT TGATATTCTT
GCAATAAACT TAGTTGACCC TAAATCTGCT CCTACTGTAG TAGATAAAGC TAAGGCAGAC
AACTTACCAG TAGTATTCTT TAATAAGGAA CCAGACGAAG CTGTTATGCA AAGCTACGAC
AAGGTTTGGT ATGTTGGTAC AACTTCTGAA GAATCAGGAA TAATCCAAGG GGAAGTAATG
GCAGAAGGTT GGAAAGCTAA TCCTGCTTGG GACAAAAATG GTGATGGAAA AATACAATAT
GTAATGCTTA AAGGAGAACC TGGTCACCCT GATGCAGAAG CTCGTACAAA ATATTCTATT
GAAACAATAA ACAAGGCTGG TATAGAAACT GAAGAGTTAG CAATGGATAC AGCTATGTGG
GACTCAACTA AAGCTACTGA AAAAATGGAT GCTTGGATTG CTAAAAATGG TGACAATATA
GAAATGGTAA TCTGTAATAA TGATGGAATG GCTTTAGGTG CTATTTCTTC TCTTGAAAAA
GCAGGATATT TAGATGGAAC TCCTGAAAAG TTTGTTCCAA TATATGGTGT TGATGCTATT
CCTGAAGCTT TAGATAAAAT CAAAGCTGGT AAAATGGCTG GTACAGTATT AAACGATGCT
AAGAACCAAG CTCAAGCTCT AGTGGATTCT TGTATGAATT TAGTAAATGG AAAAGAGATA
ACTGAAGGAA CTAATTGGAA ACTTGATGAT AAAAAATCAA TCCGTGTTCC ATATGTAGGA
ATAACTAAGG ACAATATAAA CGTTGCTGAG GATTCATATA AATAA
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| Protein sequence | MKKKGLALIL ISALTMGTLV GCGGGSGSTG SSGDTPKEND SPKIGATIYS FEDNFMSYQR
RNIEKLCNGK AELLMNDSQN NQSKQIEQVD TMIAKGVDIL AINLVDPKSA PTVVDKAKAD
NLPVVFFNKE PDEAVMQSYD KVWYVGTTSE ESGIIQGEVM AEGWKANPAW DKNGDGKIQY
VMLKGEPGHP DAEARTKYSI ETINKAGIET EELAMDTAMW DSTKATEKMD AWIAKNGDNI
EMVICNNDGM ALGAISSLEK AGYLDGTPEK FVPIYGVDAI PEALDKIKAG KMAGTVLNDA
KNQAQALVDS CMNLVNGKEI TEGTNWKLDD KKSIRVPYVG ITKDNINVAE DSYK
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