| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1538 |
|---|
| Symbol | |
|---|
| ID | 4202088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1754514 |
|---|
| End bp | 1755050 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638082416 |
|---|
| Product | rubrerythrin |
|---|
| Protein accession | YP_695981 |
|---|
| Protein GI | 110800324 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1592] Rubrerythrin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0174784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTT TAAAAGGATC TCAAACTGAA AAAAATCTTT ACAAAACCTT TGCAGGAGAA
TGTCGTGCTC GAACAAAATA TAATTTATTT GCTGAAGAGG CAAGAGAGGA AGAACAACAT
TGGATAGCAG ATATCTTTGA TGAAACTGCT AAGAATGAAT ATGCTCATGC TAGAGAAGTT
TTTAGAAGAT TTTTAGGTAA TGTAGGAGAC ATACTAGATA ACCTTATGGT AGCAGCTATG
GGGGAAAGTG ATGAATTTAA AGAAATATAT AAAGAGTTTG AAGAAACAGC ACGTAGTGAA
GGCTATGAGG AAATAGCAGA CTTTTTTAAG GAACTTAGAG AGGTAGAGGA ATCTCATAAT
GAAAGATATA TGGACTTTTA TGATAAGGTT AAATCAAAAA GTTTATATTC ATCAAAAGAA
CCTGTGAAAT GGGTATGTAC AAATTGTGGA TATATCCATG AAGGAAAAGA AGCTCCAATG
AATTGTCCTC TATGTAGATT CCCTCAAGGA TACTTTAGAC TTTTAAATGA ATGTTAG
|
|---|
| Protein sequence | MKSLKGSQTE KNLYKTFAGE CRARTKYNLF AEEAREEEQH WIADIFDETA KNEYAHAREV
FRRFLGNVGD ILDNLMVAAM GESDEFKEIY KEFEETARSE GYEEIADFFK ELREVEESHN
ERYMDFYDKV KSKSLYSSKE PVKWVCTNCG YIHEGKEAPM NCPLCRFPQG YFRLLNEC
|
|---|
| |