| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1507 |
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| Symbol | |
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| ID | 4202296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1720740 |
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| End bp | 1722197 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082385 |
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| Product | glutamate:gamma-aminobutyrate antiporter family protein |
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| Protein accession | YP_695950 |
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| Protein GI | 110800977 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00910] glutamate:gamma-aminobutyrate antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0581388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGG AAGGAACAAC AAAAAAATCA TTGACACTTT TTGGATTTTT CGCAATGACA
GCCTCCATGG TTATGGCTGT ATATGAATAT CCTACTTTTG CAACATCTAA ATTGCACTTA
GTATTTTATC TACTTTTAGG AGGTTTCTTA TGGTTTATTC CAGTTGCTTT ATGCGCTGCT
GAAATGGCAA CTGTAGATGG ATGGGAAAAA GGTGGAGTTT TCACTTGGAC TGGAAAGAAC
TTAGGTAAAA AATATGGTTT TGCAAACTTA TTTTTTGAAT TCTTTGAAAT AACAGTTGGA
TTTGTAACCA TGATTTATTT CATCCTTGGG GCTTTATCAT ATGTATTTGA CTGGCCAGCA
CTAAATAGTA ACCCAATGAT AAAATTTATA GGTGTATTAG TAATCTTTTG GATTTTAGCA
TTATCTCAAT TTGGAGGAAC AAAATACACT GCTAAAATAG CTAAAATAGG TTTTATAGTA
GGAATACTTT TACCAGCAGC TATTTTAATA ATCTTAGCTC TTGTATATAT AATTCAAGGA
AATCCTATAT ATATATCAAG TAAAGATACT TTTGTTCCAG ACTTTACAAA GGTAAATACC
TTAGTTGTAT TTGTATCCTT TATATTATCT TACATGGGTG TAGAAGCATC AGCTACTCAT
GCAAATGAAA TGGATAATCC AAAGAAAGAA TATCCATTAG CAATGCTTTT ATTAGTTATA
GTAGCAATTG TTGTTAGTAC TTTAGGAGGT CTTGCAATAG CAGCAGTTAT TCCTCAAGAT
CAAATAAATT TAAGTGCTGG GGTAGTTCAA ACCTTTGCTG TTTTATTAGG TCACTTTACA
GCTAACAATA CAATTTTAGT TAAGATAATA GCTTTATTAC TTGCCTTTGG TGTAATTGCA
GAAGTAAGTT CATGGGTTGT AGGACCAACA AGAGGAATGA TTATAGCAGC TGAAGAAGGC
GCTATTCCAA AATCATGGGC TAAAACAAAT GAACATGATG TACCAGTTTA CTTAGTTATA
GCACAAGGTA TAATTGTTAG TATATGGGAT GCTGTTTTAA CCTTTGGAGC AGGTGGAAGT
AATCTTTCAT TTTTAGCAGC AATGTCATTA ACAGTTGTAA TTTATTTAAG TGGATATATT
CTATTCTTTG CAGGATATAT AAAAGCTATA TTAGGAGAAG GATTAAATGG AGCTTATCAA
ATTCCTGGTG GAAAACCAGT TAAGATTATA GTAGCCATAA TTGGACTTGC AACTTCTATA
TTTGCATTCT TTATATCTTT TGTTCCACCT ACATCAATTG CAGGAAATGC AGTTCAATCA
CATGAGTACA TGTGGATGCT TATTATAAGC TATGTAATAT CATTAATATT ACCATTTGCT
ATTTATGATT TATGTCAAAA ATACATGCAT TCTCATGAAG GAAATATCCA TCATGCAGTA
GCAGGTCATA AACACTAA
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| Protein sequence | MKQEGTTKKS LTLFGFFAMT ASMVMAVYEY PTFATSKLHL VFYLLLGGFL WFIPVALCAA
EMATVDGWEK GGVFTWTGKN LGKKYGFANL FFEFFEITVG FVTMIYFILG ALSYVFDWPA
LNSNPMIKFI GVLVIFWILA LSQFGGTKYT AKIAKIGFIV GILLPAAILI ILALVYIIQG
NPIYISSKDT FVPDFTKVNT LVVFVSFILS YMGVEASATH ANEMDNPKKE YPLAMLLLVI
VAIVVSTLGG LAIAAVIPQD QINLSAGVVQ TFAVLLGHFT ANNTILVKII ALLLAFGVIA
EVSSWVVGPT RGMIIAAEEG AIPKSWAKTN EHDVPVYLVI AQGIIVSIWD AVLTFGAGGS
NLSFLAAMSL TVVIYLSGYI LFFAGYIKAI LGEGLNGAYQ IPGGKPVKII VAIIGLATSI
FAFFISFVPP TSIAGNAVQS HEYMWMLIIS YVISLILPFA IYDLCQKYMH SHEGNIHHAV
AGHKH
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