| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1492 |
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| Symbol | |
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| ID | 4201486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1698591 |
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| End bp | 1699772 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082370 |
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| Product | NupC family nucleoside transporter |
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| Protein accession | YP_695935 |
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| Protein GI | 110799612 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0149107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATA TTATTGGAGT TGTAGGATTA ATTGTTATTT TAGCACTTGC GTGGATTGGA
AGTAGTGATA AGAAGAATAT AAAATATAAA CCTATATTTT TAATGCTTAT TTTACAATTC
GTATTAGGAT TTATACTGCT AAATACTCAA GTAGGAAATT ATTTAGTTGG AAGTATAGCA
AATGGTTTTG ATGTGCTTCT TGCATGTGCA GGAGATGGAG TAAACTTTGT ATTTGGTGGA
CTAGTTAATA ATGATCAATT TTCGTTCTTT ATTAGTGTTC TTTTACCAAT AATCTTTATT
TCTGCCTTAA TTGGTATTTT ACAATACTTA AAAATACTTC CTTTTGTAAT TAAATACATA
GGCTTAGTTT TAAGTAAAAT TAATGGCATG GGTAAATTAG AGTCTTACAA TGCTGTAGCA
TCAGCTATAC TTGGACAATC AGAAGTATTT ATTTCTGTGA AAAAAGAACT TGCTTTATTA
CCTAAACATA GATTATATAC TCTTTGTGCA TCAGCAATGT CAACAGTATC AATGTCTATA
GTTGGTTCTT ACATGGTTTT ATTACAACCT AGATATGTTG TAACAGCAAT TGTTCTTAAT
TTATTTGGTG GATTCATTAT AGCATCAGTT ATAAATCCAT ATTCTGTATC AGCAGAAGAG
GATATTTTAG TAGTTGAGGA TGAAAAGAAA CAAACTTTCT TTGAAGTACT TGGTGAATAT
ATCTTAGATG GATTTAAGGT AGCAGTTATA GTAGCAGCTA TGTTAGTTGG ATTTGTAGCA
ATCATTGCTG TAATAAACAT GATTTTTAGA TCAATCTTTG GAATGAGCTT CCAAGAGATA
CTAGGATATG TATTCTCACC TTTTGCATTC TTAATGGGTG TACCTTTAAA TGAGTCAATA
CAAGCTGCCA GCGTAATGGC AACAAAGCTA GTATCTAATG AGTTTGTTGC AATGAATTTA
TTATCAAGTG GAACTTTAAA TTTATCAGCA AGATCAATTG GTATTGTTTC AGTATTTTTA
ATTTCTTTTG CAAACTTCTC ATCAATTGGA ATTATTTCAG GAGCAGTAAA GGGGCTTAAC
CAAGAACAAG GAAATGTAGT TGCACGTTTC GGACTTAAAC TACTATATGG TGCAACATTA
GTAAGTATGT TAACAGCAAC TATTGTTGGA TTAATTATAT AA
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| Protein sequence | MKYIIGVVGL IVILALAWIG SSDKKNIKYK PIFLMLILQF VLGFILLNTQ VGNYLVGSIA
NGFDVLLACA GDGVNFVFGG LVNNDQFSFF ISVLLPIIFI SALIGILQYL KILPFVIKYI
GLVLSKINGM GKLESYNAVA SAILGQSEVF ISVKKELALL PKHRLYTLCA SAMSTVSMSI
VGSYMVLLQP RYVVTAIVLN LFGGFIIASV INPYSVSAEE DILVVEDEKK QTFFEVLGEY
ILDGFKVAVI VAAMLVGFVA IIAVINMIFR SIFGMSFQEI LGYVFSPFAF LMGVPLNESI
QAASVMATKL VSNEFVAMNL LSSGTLNLSA RSIGIVSVFL ISFANFSSIG IISGAVKGLN
QEQGNVVARF GLKLLYGATL VSMLTATIVG LII
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