| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1490 |
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| Symbol | |
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| ID | 4202793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1695920 |
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| End bp | 1697308 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082368 |
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| Product | putative tetracycline resistance protein |
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| Protein accession | YP_695933 |
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| Protein GI | 110800888 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000919322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATTT CACTTAATAC TTTAGAAAAT GTTGAAGAAG TAAAAATAAA AAAAGCGGTA
CCTGCTGTAT TAGCTTTAAT GATTTTTGCT TTAGTTATTG ACAACTCATT TAAAATTATT
TCACCAGATT TGGCTAAAGC TTTTAACATA TCAGCCACTG CTGTTAGTTG GCAAGTAACT
TTAGCTGGAT TAGTTATTGG TATTGGAGCT GTTGTATATG CTTCTTTATC TGATTCAATA
AGTGTTAGAA CCTTATTGGT ACTAGGAATT ATATTAATAT GTGTTGGTTC ACTATTAGGA
TTTATTTTTC AGAAATCATT TTTAATTATT GTTATTTCAA GAATAATTCA GTCAGCTGGA
TTAGGAAGTG CAGAAACATT ATATGTAATA TTTATAGCAA AGTATTTTAA AGAGAGTGAA
CATAAAAAAT ACTTAGGATT TAGTACAAGT AGTTATGCTA TTTCACAGGT AATTGGTACA
ATTACTGGAG GATATATCTC AACATATTTA AGTTGGCAAG TACTATTTTT AATTCCATTA
TTAACTTTAG TAATATTACC TTTTATATTA AAATATATTC CTAAGGAAAA GAATAAAGCT
GGTAATGTGG ATTATATAGG ATTTATATTA GTTGCAACAG TTGCAGCAAC ATTAATGATC
TTTGTTTCAG GATTCCAATG GGGAGTTTTA ATAGGATTTA TAGTTGCACT TGCATTATTC
CTTATATACA TAAGTAAAAA TGAAAATGCT TTTATAAGCA TTAAGTTTTT CACAAATAGA
AATTTTATAT CAGTATTACT TGTAGCCTTT GTTATATACA GTGTACAACT TGCATTTATA
TTTATGTTCC CATTCTTAGT TGAATCTATA TACAATTATA GATTAGACCA AATTTCATTA
CTTTTAGTTC CTTCATATGT TTTAGCTGCT ACTGTAGGAG CTTTATCAGG AAAGGTTTCT
AAGAAAATAG GAAGTAAGCA ATGTATTCAA ATGGCTATAG TAGGTATAAT AGTGAGTCTT
ATTATAGGAG CTTTATTTGT AAAAACATCA GTTTTAGTAT TTATTTTTGT AATGATACTA
TTCTCAAGTT CTTTTGCTTT AATGTATGCA CCTATGATTG ATACATTAAC AAGAACAATA
CCTAAGGAAA AAACAGGAAC TGCTATTGGT TTCTATAATT TCTGTTTAAA TATAGCTACT
TCAATAGGAA TAACATATGT AGCAATATTT ATGGAAACTA AGTATTTAGG AAAGAACTTT
ACTGGACTTT TCAGTGACTT AGTAGCTATA CAATATAGTA ATGTTTTACT AGTATTAGCA
GTTATATCTT TAGTAGCACT TGTATTATAC TGGACTTTAA TCGGAAGAAG AGAGAAAAAG
GACATATAA
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| Protein sequence | MDISLNTLEN VEEVKIKKAV PAVLALMIFA LVIDNSFKII SPDLAKAFNI SATAVSWQVT
LAGLVIGIGA VVYASLSDSI SVRTLLVLGI ILICVGSLLG FIFQKSFLII VISRIIQSAG
LGSAETLYVI FIAKYFKESE HKKYLGFSTS SYAISQVIGT ITGGYISTYL SWQVLFLIPL
LTLVILPFIL KYIPKEKNKA GNVDYIGFIL VATVAATLMI FVSGFQWGVL IGFIVALALF
LIYISKNENA FISIKFFTNR NFISVLLVAF VIYSVQLAFI FMFPFLVESI YNYRLDQISL
LLVPSYVLAA TVGALSGKVS KKIGSKQCIQ MAIVGIIVSL IIGALFVKTS VLVFIFVMIL
FSSSFALMYA PMIDTLTRTI PKEKTGTAIG FYNFCLNIAT SIGITYVAIF METKYLGKNF
TGLFSDLVAI QYSNVLLVLA VISLVALVLY WTLIGRREKK DI
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