| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1482 |
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| Symbol | |
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| ID | 4203241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1680531 |
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| End bp | 1681496 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082360 |
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| Product | dihydrouridine synthase family protein |
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| Protein accession | YP_695925 |
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| Protein GI | 110801357 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000217324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATT ATTTAGCACC AATGGAAGGG ATTACTGGAT TTATATATAG AAATTCTTAT
GAGAAGTTTT TTGGAGGAAT TGATAAATAC TTTGCCCCTT TTGTTGTTCC AAATAGTAGT
AAAAGTCTTA AAACTAAGGA ATTAAGAGAT GTTTTGCCAG AGAATAATAA AGGAATCAAC
TTAGTTCCAC AAATACTTAC TAATGATTCA GAAGGCTTTA TCTCAACAGC TAGGAAGCTT
AAGCAGTTAG GATATAATGA AATAAATTTA AATTTAGGAT GTCCATCTGG AACAGTTGTT
GGAAAGAAAA GAGGGTCAGG ATTTTTAGCT CACAAGGAAG AACTTGATAA GTTTTTAGAA
GAAATATTTA AAATAGATGA CATGAAACTT TCAATAAAAA CTAGATTAGG AATGGATAAG
CCTGAGGAAT TTTATGAGCT TATAAAAATT TATAATAAGT ATCCTATGGA GGAGCTTATT
ATTCATCCTA GAACAAGACA AGATTTTTAT GCAAATAAAC CTAATTTAGA GGTTTTTAAA
GATGCAATTT CTTTAAGTAA GAATCCAATT TGTTATAATG GAGATATTTT TACTGTGGAA
GATCATAATA AATTAATTGA AACATTTCCA GAAGTAGATA AAATAATGTT AGGAAGAGGG
ATTTTAGCTA ACCCAGCCTT AATGAATGAA ATTTTAAACA ATGAGTTTAT GGACAAAAAG
GTATTAAAAG AGTTTCATGA TGAAGTATTT AATAAATACA GAGAAGTATT TAATGAAGAT
AGAAATGCAA TGTTTAGAAT GAAGGAGCTA TGGGGATATA TGATATATAT GTTCTCAAAT
AATAAAAAAT ATGCTAAGAA AATAAAGAAA GCTCAGAAGG TGGTTGAGTA TAACCAAGCT
GTTACAAGTC TATTTTTAGA ACAGGATATA CTTAAGGGAG CTGGATTATT TAGTAGTGAA
GAGTAA
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| Protein sequence | MKYYLAPMEG ITGFIYRNSY EKFFGGIDKY FAPFVVPNSS KSLKTKELRD VLPENNKGIN
LVPQILTNDS EGFISTARKL KQLGYNEINL NLGCPSGTVV GKKRGSGFLA HKEELDKFLE
EIFKIDDMKL SIKTRLGMDK PEEFYELIKI YNKYPMEELI IHPRTRQDFY ANKPNLEVFK
DAISLSKNPI CYNGDIFTVE DHNKLIETFP EVDKIMLGRG ILANPALMNE ILNNEFMDKK
VLKEFHDEVF NKYREVFNED RNAMFRMKEL WGYMIYMFSN NKKYAKKIKK AQKVVEYNQA
VTSLFLEQDI LKGAGLFSSE E
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