Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1458 |
Symbol | |
ID | 4202829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1642704 |
End bp | 1643195 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638082336 |
Product | hypothetical protein |
Protein accession | YP_695901 |
Protein GI | 110799148 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000609235 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGAAAA AGGTAATATT CCCTATAGTG ATTATAATAA TTATTCTTGG AGTTCTTGTT TCTATTTTTA TTAAAGAAGA TAATTCCTTT AAGGTGAAGG AAAGTGAAGT AGTGGCAATG AAATACTATA TGAATAAAGA AAGAAATGAA AATTACCATA ATGTACCTAA GGATTTAGAG AAGAAGAGTA TTGAAGAGGT AGTAAGTGTT TTAAATGAAA GTGATGTTAC GGAAAAAAAG AACTTTGCAC CAATAACTGA TAGTGATAGG AAATTATATA TATTTTTAAA AAACAATGAT GTAATAGTTA TAAATAATAA TAGTATAGAT GAGGAAAAAT ACATAGTTGA ATATCCTAAT GACTCAATTT TAGGTAGCAG TAATAAATCA AAATATATGG TAATAAACTC AGAAAGGTTA AAAAATGTCT TTTTAAATAT AGAAAATTCT TTTAATGATG TAAACGATTA TAGGCAGAGA ATGAGAGTAT AG
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Protein sequence | MGKKVIFPIV IIIIILGVLV SIFIKEDNSF KVKESEVVAM KYYMNKERNE NYHNVPKDLE KKSIEEVVSV LNESDVTEKK NFAPITDSDR KLYIFLKNND VIVINNNSID EEKYIVEYPN DSILGSSNKS KYMVINSERL KNVFLNIENS FNDVNDYRQR MRV
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