Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1422 |
Symbol | |
ID | 4202712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1604016 |
End bp | 1605326 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082302 |
Product | uracil-xanthine permease |
Protein accession | YP_695867 |
Protein GI | 110798566 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0087754 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAAC AATTAATAAG CAAAGAGCAA GGAAGTATTA AAACATTAGG AATTTTCTCT TACTTTAAAA ATGGAATTTT AGGATTACAA CATTTAGTTG CTATGTTTGG AGCTACAATA CTAGTACCAC TAGTAACAGG CTTAGATCCA TCAGTAGCTT TATTCACAGC AGGGATAGGT ACTTTAATAT TCCACTTATG TACTAAAGGA AAAGTTCCAG TATTTTTAGG ATCATCCTTT GCATTTATAC CTGTAATACA AGTAATTGCA TCTAAATATG GAGATTTAAG ATATGCACAA GGAGGTATAT TCTTTGCAGG ATTAGCTTAT GTATTAATTT CTTTTGGAAT AAAGAAAATA GGTGTAGATA AAATAAAAAG ATTTTTACCT GCAAGGGTAG TTGGCCCAAT GATAATGGTT ATAGGGTTAA ATCTTATACC TAATGCCTTA GAAATGGCTG GGGTAAAATC TTTAATAGCT GGAGAAACAG GAGCTATGAC TTCAGTTTTA ATAGCTTGTA CTACATTAGG ATTAGCATTA ATAATAAGTA AGTTTGGAAA GGGATTTTTT TCACAGTTAG CAATAATAAC AGCAGTTTGT GTAGGATATA CTTTAAGTTT AATTTTAGGA CAAGTTGATA CAAGTTTAAT TCAACAAAGT ACAATGGTTG CAGTACCAAA CTTTACATTG CCAAAATTTG ATTTTGGAGC AATAATGATA ACTTTACCAG TTATTTTAGC TGTATCAATG GAGCATATAG GAGATATAAC TACTAATGGA CAAGTTGTAG GTAAAAACTT TATAGAAGAT CCAGGACTAA ATAGAACAGT ATTAGGAGAT GGATTGGCAA CTTTAGTTGC ATCTTTATTA GGGGGACCAG CTAATACTAC TTACGGTGAA AATACAGGAG TTTTAGCTAT AACTAAAAAT TATAATCCAT CAATTTTAAG ATTAACAGCT GTTTTTGCCA TAATACTAAG CTTTATAGCT AAGTTTGGAG CGGTTATAAG AACAATTCCA CAATCAGTAA TGGGAGGAAT AAGCTTAATG CTATTCTCAA TGATTGCTTT AGTGGGAGTT AAAACTATAA AAAATGAAGG GGTTAAATTA AATAAAACTA ACCTAATATT AATGGGATCA ATAATTTTTG TAGGTTTATC AGGCTTATTT ATGTCAGAGC CTATAGGAAT TGAAATAAGT GAAGCTGTAA GCATATCAGG CTTAAGCTTA GCAGCTTTAA TAGGTGTTAT TTTAAACTTA ATAATCACTA AATTTGAATC AGCAAAGAGT AGAAAAGAAG TAATTGCTTA A
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Protein sequence | MAQQLISKEQ GSIKTLGIFS YFKNGILGLQ HLVAMFGATI LVPLVTGLDP SVALFTAGIG TLIFHLCTKG KVPVFLGSSF AFIPVIQVIA SKYGDLRYAQ GGIFFAGLAY VLISFGIKKI GVDKIKRFLP ARVVGPMIMV IGLNLIPNAL EMAGVKSLIA GETGAMTSVL IACTTLGLAL IISKFGKGFF SQLAIITAVC VGYTLSLILG QVDTSLIQQS TMVAVPNFTL PKFDFGAIMI TLPVILAVSM EHIGDITTNG QVVGKNFIED PGLNRTVLGD GLATLVASLL GGPANTTYGE NTGVLAITKN YNPSILRLTA VFAIILSFIA KFGAVIRTIP QSVMGGISLM LFSMIALVGV KTIKNEGVKL NKTNLILMGS IIFVGLSGLF MSEPIGIEIS EAVSISGLSL AALIGVILNL IITKFESAKS RKEVIA
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