| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1412 |
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| Symbol | |
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| ID | 4201232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1590375 |
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| End bp | 1592981 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082292 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_695857 |
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| Protein GI | 110798587 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.275208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGGTACA AAAAATCAAA AAATGAAATA CTACAGGAAT TAGATGTAGA TGAAAAAAAT
GGTCTTTCCT CTACTGAGGC ATTAAGAAGA CTTGAAAAGT ATGGTAAGAA TAAACTTGAA
ACTAAAAAGA AGAAAACTCT ATTTAAACAG TTCTTATCTC AGCTTAAAGA TGTAATGATT
TATATACTAA TCATAGCTGC AATAATATCT GCATTTTTAG GAGAAATAAG TGATGCTTTA
ATAATACTCT TAGTCATAAT AATAAATGCA GTTATAGGAG TTATTCAAGA ATCTAAAGCA
GAAAAAGCCT TAGATGCTTT AAAGGAACTT TCCACTCCTA AAGCTCTTGT TAAAAGGGAT
GGTTCTTTAA AGGAAATTCT TTCAGAAGAT ATTGTACCAG GGGATATTGT AATAATAGAT
GCTGGTAGAT ATATTCCTGG TGATTTAAGA TTAATTGATA CAGCAAACTT AAAAATAGAG
GAATCTGCTT TTACAGGTGA ATCTGTTCCT TCTGAAAAAG ATGCTTCTTT TTTACCAGAT
AAAGAAATTC CTATTGGAGA CCAAAATAAT ATGGCCTTTA TGTCTACTCT AGCTACATAT
GGTCGTGGAG TTGGAGTGGT TGTTGGTACT GGAATGAATA CTGAAATTGG TAAAATAGCT
AAAATGATAG AACAAGAAGA AAATGATGAG ACTCCATTAC AAAAAAAATT AAGCGAACTT
GGAAAAATTC TAGGATTTTT AGCTGTAGGT ATATGTATTC TAATTTTTAT TATTTCATTT
TTTCAAGGAA GAGATTTACT TGAAATGTTC TTAACTTCTA TTTCTTTGGC TGTTGCCGCT
ATTCCAGAGG GATTGCCTGC CATAGTTGCT ATAGTATTAG CACTAGGAGT TCAAAGAATG
GTAAAAAAGA ATGCAATAAT AAGAAAGCTT CCTGCTGTGG AAACTCTAGG TTCTGTAAGT
ATAATATGTT CTGATAAGAC AGGTACACTA ACTCAAAATA AAATGACTGT AACTACTGTT
TACACAAATG ATTCTTATAT AAAAGAGAGT GAATTTAATT TAAATGATAA TGAATCTAAA
CTTTTAGTAG ATTGTATGGT TCTTTGTAAT GATGCCACAT ACTCAGAAAA AAGCCAAACT
GGCGATCCTA CTGAAATAGC ACTTTTAGAA TCTCCTTTTA AGCTTAATAT ACTAAAAGAA
AAACTTGAAA AAGAATTTAA AAGAATAGAT GAAATTCCTT TTGATTCTGA TAGAAAGTTA
ATGACTACAG TAAACTTAGT AGATGACAAA AAAGCTCGTG TATTTACTAA GGGTGCCTTA
GATTCTATAC TTTCAATTTG TAATAAAATA TCTGTTAATG GAAAATTAGT AGACTTCTCA
AAGGAATATA AAGCTAAAGT TTTAGAAAAC TCTAATATAA TGTCAGACAA AGCCTTAAGA
GTTCTTGCCT TTGCATATAA AGATATATCT AAAGAAAATA TAGTTTTAGA TTCTTTAGAA
AAAGATTTAG TTTTCATTGG CATGGTTGGA ATGATTGATC CACCTAGACT AGAGGTTAAA
GATTCTATTA AACTATGTAA AAGTGCTGGA ATAACTCCAG TTATGATAAC TGGAGACCAT
AAAAATACAG CTTTTGCTAT TGCAAATGAA CTAGGAATAG CAGAAGATAT TTCTCAAGCT
ATTACTGGTC ATGAAATAGA TAAATTTAAA GAAGAAGAGT TCAATGAAAA AATTATAAAT
TACAGAGTTT TTGCAAGAGT GTCTCCTGAA CACAAGGTAA AAATAGTTAA AGCCTTTAAG
TCTCATGGAA ATATAGTTTC TATGACTGGA GATGGAGTTA ATGATGCACC TTCCTTAAAG
GCTGCTGATA TAGGTGTAGC TATGGGCATA ACAGGTACAG ATGTATCTAA AGGAGCCTCA
GATATGATTC TTACTGATGA TAATTTTTCA ACAATAGTTT CTGCTGTAGA AGAAGGAAGA
AAAATCTATC TAAATATAAA AAAATCTATA GTATTTTTAT TATCCTGTAA TTTAGGAGAA
ATACTAACTC TATTTACAGC TATATTACTA AATTGGAATT CTCCTCTTCA ACCAATACAC
ATTCTTTGGG TTAATTTAAT TACAGATAGT TTTCCAGCTC TAGCTTTAGG AGTTGATAAA
GCAAAGGAAG ATGTTATGAA TAACCCTCCT AGAAATCCTA AGGAAAGTAT ATTTGTTAAG
TCTGATAAAA TTCAACTTAT AATAAATGGA GTTTTAATAG GAGGAATAAC ACTATTTGCA
TTTAAATTAG GTGAAAGACT TTATGCTGAT TCCTTAATTC ATGCTCAAAC AATGGCTTTT
GTTGTACTAA GTGTATCTCA ATTATTTTTA TCACTATCTC TAAGAAGTAA TACTAAATCA
GCGTTCTCCT TAGGAATATT TTCTAATAAA TACTTAGTAT ATTCAATTTT ACTTGGAATC
TTCCTTCAAG TAATAATAAT TTCAATAAGC TTTATTGCTA ATATATTTAA GGTTACTCCT
TTACTTTTAT ATGATTGGAT TGTGGTTATA CTTGTATCCT TAATTCCATT TGCAATAAAT
GAAATCTTAA AATTATTTAG AAAGTAA
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| Protein sequence | MWYKKSKNEI LQELDVDEKN GLSSTEALRR LEKYGKNKLE TKKKKTLFKQ FLSQLKDVMI
YILIIAAIIS AFLGEISDAL IILLVIIINA VIGVIQESKA EKALDALKEL STPKALVKRD
GSLKEILSED IVPGDIVIID AGRYIPGDLR LIDTANLKIE ESAFTGESVP SEKDASFLPD
KEIPIGDQNN MAFMSTLATY GRGVGVVVGT GMNTEIGKIA KMIEQEENDE TPLQKKLSEL
GKILGFLAVG ICILIFIISF FQGRDLLEMF LTSISLAVAA IPEGLPAIVA IVLALGVQRM
VKKNAIIRKL PAVETLGSVS IICSDKTGTL TQNKMTVTTV YTNDSYIKES EFNLNDNESK
LLVDCMVLCN DATYSEKSQT GDPTEIALLE SPFKLNILKE KLEKEFKRID EIPFDSDRKL
MTTVNLVDDK KARVFTKGAL DSILSICNKI SVNGKLVDFS KEYKAKVLEN SNIMSDKALR
VLAFAYKDIS KENIVLDSLE KDLVFIGMVG MIDPPRLEVK DSIKLCKSAG ITPVMITGDH
KNTAFAIANE LGIAEDISQA ITGHEIDKFK EEEFNEKIIN YRVFARVSPE HKVKIVKAFK
SHGNIVSMTG DGVNDAPSLK AADIGVAMGI TGTDVSKGAS DMILTDDNFS TIVSAVEEGR
KIYLNIKKSI VFLLSCNLGE ILTLFTAILL NWNSPLQPIH ILWVNLITDS FPALALGVDK
AKEDVMNNPP RNPKESIFVK SDKIQLIING VLIGGITLFA FKLGERLYAD SLIHAQTMAF
VVLSVSQLFL SLSLRSNTKS AFSLGIFSNK YLVYSILLGI FLQVIIISIS FIANIFKVTP
LLLYDWIVVI LVSLIPFAIN EILKLFRK
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