| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1397 |
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| Symbol | |
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| ID | 4203521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1569982 |
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| End bp | 1571244 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638082277 |
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| Product | vanW-related protein |
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| Protein accession | YP_695842 |
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| Protein GI | 110799778 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000158977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGAAGTA AGAGAATAAA AAAATTAAAT TCAAAAAAGG TAGCACTACA AATTTCACTA
GTACTTATAG CTTTATTCTT AATTTTAATT TCTGTAGTTT TATTTAAAAC TTATTCTAGT
AAAAATGTTA CTTATGAAGG AATTTATGTT GAAAACATTA ATGTGTCAAA TTTAAATGAG
AAAGATTTAA AGGAAAAATT AAATGAGCAC TACTCTGATT TATTAAATAA TTTTAAAATA
ACATTTAATT ATAAAGACAA TTTTAATGAA ACTTTTTCAG CAAAAGATTT AGGATTTTTC
TTTGATATTA ATGATTTATC TAATCAGGTT TTTTCTTTCG GAAAAAATAG CAATATATTT
TCTAATACAA TAGAAAGATT AAAGTTAAAA TCTAATCCTA AATATTTTCA GTTTAAACCT
GAATCAAATT CAGAGGTTTT AAGTGAAAAA CTTTCTGAAA TAAGTAATAA AATCAATAAA
GAAAAGGTTG AACCAACTAT TTCTTTTTCA AATGATTCTA TATCAGCAAC TAAAGAACAA
ATTGGGTACA AGCTTGACTT AGAAAAGCTT ACTTCTGAAA TAGTTAATGA TTTAAATAAT
AGTCATGATA GTCTAAATTG TACTATTAAT ATACCTGTGG AAGAAATAAA ACCTAAATTA
ACTCAAGAAA CTGTTAATAA CATGGTTATT TTAGGCTCAT ATACTACTAA ACTTCCTAGT
TTAACAGGTG GACGTACTAA AAATATTAGC AATTATTTAA GTAAGCTTAA TGGTACTATA
TTAATGCCAG GAGATATTTT TTCTGCTGAT AAAGAAGGAG AAGATAGAAC TGAAAGTAAT
GGTTATACTT ATGCCCCTGG TTATATTGGA AACAAAGTAG TAGATATATT AGCCGGTGGA
ATATGTCAAG GAGTTACAAC TCTTTATAAC TCAGTATTAT ATGCTGACTT AAAAATAGTT
GAGAGAGCTC CTCATAGCCT TCCAGTAACT TATGCTCCTA TAGGTAGAGA TGCTACTATG
GCAAGTGGAG TTATTGACTT TAAGTTTCAA AATAATATGA ATAATCCAGT TATTGTTCAA
ACTTATATAA CTTCTTCTGG ACAAGTTAAG TCTAACATTT GGGGTATAAA AGAAGACCCA
GGAAAAGAAA TAGTTATATC TGTAGATCAA CATGGACCTA AATCATCAAC AACTTATAAG
GAAACTTATG AAAATGGAGT ATTAGTAAAA AAAGAAGTGT TATCAAAGGA CAAATACAAT
TAA
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| Protein sequence | MRSKRIKKLN SKKVALQISL VLIALFLILI SVVLFKTYSS KNVTYEGIYV ENINVSNLNE
KDLKEKLNEH YSDLLNNFKI TFNYKDNFNE TFSAKDLGFF FDINDLSNQV FSFGKNSNIF
SNTIERLKLK SNPKYFQFKP ESNSEVLSEK LSEISNKINK EKVEPTISFS NDSISATKEQ
IGYKLDLEKL TSEIVNDLNN SHDSLNCTIN IPVEEIKPKL TQETVNNMVI LGSYTTKLPS
LTGGRTKNIS NYLSKLNGTI LMPGDIFSAD KEGEDRTESN GYTYAPGYIG NKVVDILAGG
ICQGVTTLYN SVLYADLKIV ERAPHSLPVT YAPIGRDATM ASGVIDFKFQ NNMNNPVIVQ
TYITSSGQVK SNIWGIKEDP GKEIVISVDQ HGPKSSTTYK ETYENGVLVK KEVLSKDKYN
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