| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1358 |
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| Symbol | mutS |
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| ID | 4201810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1532731 |
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| End bp | 1535463 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082239 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_695804 |
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| Protein GI | 110799241 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.476923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGA CTCCGATGAT GAGGCAATAT TTTGAGATAA AGGAAAATTA TAAGGATTGT
ATTCTATTTT TTAGACTTGG AGACTTCTAT GAGATGTTCT TTGAGGATGC AGAAACAGCT
GCAAGGGAAT TAGAATTAGT TCTTACTGGA AGAGATTGTG GCTTAGAAAA AAGAGCACCT
ATGTGTGGAA TTCCGTTTCA TGCATCTAAT TCATATATAG GAAGATTAGT AGCTAAGGGG
TATAAGGTTG CTATTTGTGA ACAAGTTGAA GATCCTAAAT TTGCTAAAGG AATTGTTAAA
AGAGATGTTA TAAAGGTTAT AACTCCTGGA ACATATACAG ATTCTTCTTT TGTTGAGGAA
ACAAAAAATA ATTATATAAT GACTATTTAT GCAGACTTAG AGAGAAATAG ATGTTCACTA
GCTATAACAG ATATTTCTAC TGGAGATTTC TTAGCTACAG AGGGAGAATT AGAAAAGGGA
GTTATTTTAG ATGAAATATC TAAGTTTAAT CCTAAAGAAA TAATACTTTT AGATTCTTTA
GATCAAGAGC TTATAAAAGA TATAACATTA ACTACTCCAG CTTTAATAAG TAGAAAGCCT
ATAGAATATT TTGAGGAAAA CTTTGAGGAA GTATTAAATA ATCAATTTGG AGAAAAATCA
AACTCTCTAA GTTTAATGGT TAAGAAATCA AGTAATGCTT TAGTTAAATA CATACTAGAC
ACTCAAAAAA TAAGCTTAAC CAATATAAAT GATATAGAAG TATATAGTTT GGTTGACTTT
ATGACTATAG ATTTAAGTTC TAGAAGAAAT TTAGAGCTTA CAGAGAATCT AAGAGAAAAA
AGCAAGAAGG GTTCTCTTCT TTGGGTATTA GATAAGACAG AAACTTCTAT GGGAAGTAGA
ATGCTTAGAA GATGGATTGA AGAACCTCTT GTTAATAAGG AAAAGATAAC TTTAAGATTA
AATGCTGTAG AAGAATTATT TAATGATCTT TCTTTAAATG ACTCTCTTAA GGAAGCTTTA
CATGATATTT ATGATATAGA GAGAATATTA GGGAAAATTT CAAATAAAAA TGCTAATGCT
AAGGATTTAA TAGCATTAAA AACATCTATA GGTAAAATTC CTAATGTAAA AGGAATTATA
GAAAATTGCA CTTCAAGTCT TCTAAAGAAT TATCACCATA ATTTAGATGA CTTAAGAGAT
ATTTATGATC TTTTAGAAAA ATCTATAAAA GAAGATCCAT CCCTAACATT AAAAGATGGT
GATTTAATAA AAGATGGATT TAATGGTGAA ATAGATGAAT TAAGACTTGC TAAGACTAAC
GGTAAGGATT GGATATCTAG CTTAGAAAAT AGAGAAAGAG AGTTTACTGG CATAAAATCT
TTAAAGGTAG GATTTAATAA GGTCTTTGGT TATTATATAG AAATATCTAA GGCTAATTAT
AGTTCTATTC CTGAAGGAAG ATATATAAGA AAGCAAACTT TAGCTAATGC AGAGAGATTT
ATTACTCCAG AACTTAAGGA AATAGAAGAA AAACTTTTAG GAGCTAGTGA AAAACTTTGC
TCTTTAGAAT ATGATATTTT CCTAGATATA AGAAATGAAG TTGAAAATCA TATAGATAGA
CTAAAAACTA CTGCTAAGAT AATTGCTGAG TTAGATTGTA TAAGCAATTT AGCCTTTGTA
GCTTTAGAAA ATGATTTTAT AAAACCTGAA ATTAATGAAG ATGGGGAAAC TAAAATAGAA
AATGGAAGAC ACCCTGTTGT TGAAAAGGTA ATTCCTAAGG GAGAGTTTAT TCCTAATGAC
ACTATTATAA ATAAAGATGA TAATCAACTT CTTATAATAA CAGGGCCTAA TATGGCTGGT
AAATCAACAT ATATGAGACA GGTAGCTATT ATTACTTTAA TGTGTCAAAT AGGTTCCTTT
GTGCCAGCTA GTAAGGCTAA TATAAGTGTA GTAGATAAAA TCTTTACTAG AATAGGAGCT
TCTGATGATT TAGCAGGTGG TAAAAGTACA TTTATGGTTG AAATGTGGGA AGTTTCTAAC
ATTTTAAAAA ATGCTACAGA AAATAGCTTG GTTCTTTTAG ATGAAGTTGG AAGAGGAACG
AGTACATATG ATGGATTAAG TATAGCTTGG TCTGTTATAG AGTATATATG TAAAAATAAA
AATTTAAGAT GTAAAACTCT TTTTGCTACT CATTATCATG AGTTAACTAA ATTAGAAGGA
GAAATTCACG GAGTTAGAAA TTATTCAGTA GCTGTGAAGG AAGTTGATAA CAATATTATC
TTCTTAAGAA AAATAATAGA AGGTGGAGCA GATCAATCTT ATGGTATTGA GGTTGCTAAA
CTTGCTGGTA TTCCAGATGA GGTAATAAAT AGAGCTAAGG AAATCTTAGA AACTCTTGAA
ATGGAATCTT CAAAGGATAA CTTAGATTTA GCTCTTAAAG AAGTAAATGC TTCAAAAGAA
GACATAGAAG AAGCCTCTAT TACAACCTCT TATGAAGTTA AAGAAACCCT AGTAGAAGAG
GATAAAATTG AAATTAAAGA AGAAGTTATT TCAAAAGCTT CAGAGGCTAA AACACATAAA
AAAGAAGATG ATCAAATACA ATTAGATTTT TCTGCCATAG GAAAAGATAA TTTGATAAAA
GAACTTTCAG AAGTTGATAT TTTATCTTTA AATCCTATGG AGGCTATGAA TAGATTATAT
GCTCTAGTTA AAGAAGCTAA AAATTTAATT TAG
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| Protein sequence | MKLTPMMRQY FEIKENYKDC ILFFRLGDFY EMFFEDAETA ARELELVLTG RDCGLEKRAP
MCGIPFHASN SYIGRLVAKG YKVAICEQVE DPKFAKGIVK RDVIKVITPG TYTDSSFVEE
TKNNYIMTIY ADLERNRCSL AITDISTGDF LATEGELEKG VILDEISKFN PKEIILLDSL
DQELIKDITL TTPALISRKP IEYFEENFEE VLNNQFGEKS NSLSLMVKKS SNALVKYILD
TQKISLTNIN DIEVYSLVDF MTIDLSSRRN LELTENLREK SKKGSLLWVL DKTETSMGSR
MLRRWIEEPL VNKEKITLRL NAVEELFNDL SLNDSLKEAL HDIYDIERIL GKISNKNANA
KDLIALKTSI GKIPNVKGII ENCTSSLLKN YHHNLDDLRD IYDLLEKSIK EDPSLTLKDG
DLIKDGFNGE IDELRLAKTN GKDWISSLEN REREFTGIKS LKVGFNKVFG YYIEISKANY
SSIPEGRYIR KQTLANAERF ITPELKEIEE KLLGASEKLC SLEYDIFLDI RNEVENHIDR
LKTTAKIIAE LDCISNLAFV ALENDFIKPE INEDGETKIE NGRHPVVEKV IPKGEFIPND
TIINKDDNQL LIITGPNMAG KSTYMRQVAI ITLMCQIGSF VPASKANISV VDKIFTRIGA
SDDLAGGKST FMVEMWEVSN ILKNATENSL VLLDEVGRGT STYDGLSIAW SVIEYICKNK
NLRCKTLFAT HYHELTKLEG EIHGVRNYSV AVKEVDNNII FLRKIIEGGA DQSYGIEVAK
LAGIPDEVIN RAKEILETLE MESSKDNLDL ALKEVNASKE DIEEASITTS YEVKETLVEE
DKIEIKEEVI SKASEAKTHK KEDDQIQLDF SAIGKDNLIK ELSEVDILSL NPMEAMNRLY
ALVKEAKNLI
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