| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1341 |
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| Symbol | ispH |
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| ID | 4203260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1515645 |
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| End bp | 1516493 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082222 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_695787 |
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| Protein GI | 110799385 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0822919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAA ACGTAATTTT AGCTAAGAAT GCTGGCTTTT GCTTTGGAGT AAAAAGAGCA
GTTGATGAAG CTATAAAATA TCAAAAAGAA TTTGGAAAGA AAATATATAC TTTAGGACCA
CTTATTCATA ACAATGATGT TGTTAATTAT TTAGAGGATA ATGATATATT TGCAATTGAA
CTTTCAGATG CTGATTCTTT AAAGAAGGGG GATGTTGTAC TTATAAGATC CCACGGGGTT
AAAGAAAGTG TAATAAAAGA TTTAACAGAC AAGGGTTTAA TTGTTAAAAA TGCAACTTGT
CCATATGTAA CTAACATTCA ACTAAAAGTT AAAAAATGTT ATGAACAAGG ATATAAGATA
ATAATTGTTG GGGATGAAAA TCACCCAGAA GTTATTGGAA TTAATGGCTG GTGTAATGAT
TCTGCCATAA TAACAAATGG AAAAACAGAA CTTGAAAATA TTCCAGCAAA GGTTTGTGTA
GTTTCACAAA CTACTGAGAA AAAAGAAACT TGGAACAAGG TTTTAAATGA AATAGTAAGA
GCAAGTAAAG AAATAGTTGC TTTTAACACT ATTTGTTCAG CTACTGATGT TAGACAAAAA
AGTGTACAAG AGCTTTCAAA AGAGGCTGAT TTAGTTTTTG TTATAGGTGG AAAGAATAGT
TCTAATACAA CAAAATTATA TGAAATATGC AAAAAGGAAT GTCCTAAGAG CTATCATATA
GAAAATGTTA AAGAATTAGA TGAAAGCCTA TTAGAAGATG AAAGTGTTAA AACTATAGGA
ATTACTGCTG GGGCTTCAAC TCCAGATTGG ATAATAAATG AAGTGATTTC TAAGATTAAA
GAATTATAA
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| Protein sequence | MERNVILAKN AGFCFGVKRA VDEAIKYQKE FGKKIYTLGP LIHNNDVVNY LEDNDIFAIE
LSDADSLKKG DVVLIRSHGV KESVIKDLTD KGLIVKNATC PYVTNIQLKV KKCYEQGYKI
IIVGDENHPE VIGINGWCND SAIITNGKTE LENIPAKVCV VSQTTEKKET WNKVLNEIVR
ASKEIVAFNT ICSATDVRQK SVQELSKEAD LVFVIGGKNS SNTTKLYEIC KKECPKSYHI
ENVKELDESL LEDESVKTIG ITAGASTPDW IINEVISKIK EL
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