Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1331 |
Symbol | accD |
ID | 4202308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1507652 |
End bp | 1508530 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082212 |
Product | acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
Protein accession | YP_695777 |
Protein GI | 110798669 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
TIGRFAM ID | [TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00414732 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGA ATTTATTAAA TAAAAGAAAG TATATAACTG TTAGTTCAGT TGAATTAAAT GATACTGAAT TAAATGAAGA TGAAAAACCA AATATACCCT CTGGTATGTG GAGCAAGTGT GAAAAGTGTG CAAAAATCTT ATATACTGAA GATTTAAGAG AAAATTTTAA TGTGTGTCCT AATTGTGGTC ATCATTTTAA GTTAGGAGCA TATGAAAGAA TTAAATATTT AACAGATGAA AATACTTTTG TTGAGTTTGA CAAAAAAATG GTTGGAAGAA ATCCCTTAGA TTTTAATGGA TATGAAGAGA AGATTAAAGG ATATCAAAAG AAAAGTCATG TTATTGAAGG GGTTGTAACA GGAGAAGCTT ATATTGCTCA GAGAAAAGTA GTTCTTTGTG TAATGGATTC TAATTTTATG ATGGGAAGTA TGGGAACGGC TGTTGGTGAA AAGATTACTA GAGCCATTGA ATATGCAACT AAAAATAGAC TTCCTTTAAT AATATTTACT TGCTCTGGTG GAGCGAGAAT GCAAGAGGGA ATATATTCTC TTATGCAAAT GGCAAAGGTT AGTGGGGCAA TTTATAGACA TGGTAGAGAG AACTTATTAT ATATTACAGT ATTAACAAAT CCTACTACTG GTGGGGTAAC TGCTAGCTTT GCCATGGAAG GCGATATCAT ATTAAGCGAG CCAGGATGTT TAGTTGGTTT TGCAGGTAGA AGGGTAATAG AAGGAACTAT TAATGAAAAG TTACCTGATG ATTTCCAAAC TGCAGAATTT TTATTGGAAA AAGGATTTAT AGATAAGATA GTACAAAGAA AAGATTTAAA ACAAGTAATA ACTTCTCTTT TAAGAATGCA TGAGGTGGAT TATGAGTAG
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Protein sequence | MIKNLLNKRK YITVSSVELN DTELNEDEKP NIPSGMWSKC EKCAKILYTE DLRENFNVCP NCGHHFKLGA YERIKYLTDE NTFVEFDKKM VGRNPLDFNG YEEKIKGYQK KSHVIEGVVT GEAYIAQRKV VLCVMDSNFM MGSMGTAVGE KITRAIEYAT KNRLPLIIFT CSGGARMQEG IYSLMQMAKV SGAIYRHGRE NLLYITVLTN PTTGGVTASF AMEGDIILSE PGCLVGFAGR RVIEGTINEK LPDDFQTAEF LLEKGFIDKI VQRKDLKQVI TSLLRMHEVD YE
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