| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1321 |
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| Symbol | rnfB |
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| ID | 4203430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1499332 |
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| End bp | 1500153 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082202 |
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| Product | ferredoxin |
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| Protein accession | YP_695767 |
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| Protein GI | 110798895 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACTTTT CAAGTATATT TTATTCTATT TTAGTTTTAG GTGTATTAGG TTTTTTATTT
GGGATTCTTT TAGGATTTGC ATCTAAAAAG TTTGAAGTTA AAGTAGATGA GAGAGTTACT
AAAATAAGAG AGATTTTGCC AGGAGCTAAC TGTGGAGGGT GTGGCTATCC AGGGTGTGAT
GCCTATGCTA ATGCTTTAGT TTATGAAGGA GCTGATATTA GTTTGTGTGG AGTAGGTGGC
CAAAATGTAG CTAAGCAAAT TGGTGAAATA TTAGGAGCAA AGGTTAAACC TGTTGAAAAG
AAAGTTGCTT TTGTAAAGTG TATGGGAGAT TGTAAAAATA AAAAGATTCA ATTAAATATT
CCAGAAAATA AAAATTGCAT AGAGGCTAAA GAATTTTTAA AAGATAATGA AAGTGAAGGA
TGTAGCTTTG GATGCTTTGG ATTAGGAAGC TGTAAAGATG CATGTAAATT TGAAGCAATA
AGTATTATAG ATGGTATAGC AAAAGTTGAT TCTTCAAAAT GCGTAGCATG TAAAGCTTGT
GTAAGTGCAT GTCCACAAAA TCTTATAGAT ATAATAAAGG AAGATCAAAA GGTAATTGTT
AGTTGTAATT CTAATGATAG TGGAAAAATT GTAAATCAAA ATTGCTCCGT AGGATGCATA
GGATGTAAGC TATGTGAAAA AAATTGTCCA AGTAAAGCCA TAAGGATTGA AAATAACCTT
GCAATAATTG ATTATGAAAA ATGTACATCT TGTGGGATAT GTGTATCTAA ATGTCCTAAA
AAAGCAATAA ATTTAAGAAA AAATAACAAT GAAATTTTTT AA
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| Protein sequence | MDFSSIFYSI LVLGVLGFLF GILLGFASKK FEVKVDERVT KIREILPGAN CGGCGYPGCD
AYANALVYEG ADISLCGVGG QNVAKQIGEI LGAKVKPVEK KVAFVKCMGD CKNKKIQLNI
PENKNCIEAK EFLKDNESEG CSFGCFGLGS CKDACKFEAI SIIDGIAKVD SSKCVACKAC
VSACPQNLID IIKEDQKVIV SCNSNDSGKI VNQNCSVGCI GCKLCEKNCP SKAIRIENNL
AIIDYEKCTS CGICVSKCPK KAINLRKNNN EIF
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