Gene CPF_1315 details

Gene Information

• Locus tag: CPF_1315
• ID: 4201103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1494141
• End bp: 1494554
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 638082196
• Product: hypothetical protein
• Protein accession: YP_695761
• Protein GI: 110798980
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00290766
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTATGGC TTTGGGTAGT AGTTATTCTA GCTGGAATAA TAATAGACTA TTTAAGTTCT 
GATGTTCTAT TTGTTGGATT TTCCTTTGGG GCTTTAGGTG GTTTAGTATT AGCATTTCTA 
GATGTGAATG TAATATTACA ATTCATACTA TTCTCCATAA TAACAATTTT ATTTTTCTTC 
TATGTTTATC CTAAAATTAA AAGAAAGATA AAAGTAGATA ATATAGGAAC AAAAACCATG 
GAACAATCCT ATATAGGAAG AAAAATTATA TTAGATGAAA ATGTAGAAGA TTCATCATTG 
ATTAAATTTG AGGGGATTTA TTGGACATTT AAAAGTGTTA GTGGACCATT AAAGAAAGGG 
ACAGAAGTCG AGATCATAGG AATAGAAGGA AATAAAATTC TAATAAAAAA ATAA 

 

Protein sequence

MLWLWVVVIL AGIIIDYLSS DVLFVGFSFG ALGGLVLAFL DVNVILQFIL FSIITILFFF 
YVYPKIKRKI KVDNIGTKTM EQSYIGRKII LDENVEDSSL IKFEGIYWTF KSVSGPLKKG 
TEVEIIGIEG NKILIKK