Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1305 |
Symbol | mtnN |
ID | 4202538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1483031 |
End bp | 1483831 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082186 |
Product | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Protein accession | YP_695751 |
Protein GI | 110799423 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00324691 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAATATAT TAAAAAAGAC AACAAGTGTA TTATTAGCTA TATTAATTAC AAGTTTTAGC TTAATTGCAT GTGAAAGCAA GAAAAATGTA GAAGCATCTA AGGAAGAAAA TACTATAGGA ATCATAGGTG CTATGAATGA AGAACTAGAA GTACTTCTTA AGGATATGAA AAATCAAAAG GAAGTAAAAA GAAATGATTT AACTTTTTAT GAGGGAGACT TATGGGGTCA ACATGTTGTA GCTGTTGTAT CAGGAGTAGG AAAAGTTAAT GCAGCTTCAT GTACTCAAAT ATTAGCAAGT GAGTTTAATG TTAAATCTTT AATAAATATA GGGGTTGCTG GAGGAGTATC TAAAGATATA TATCCAGGAG ATATAGTTAT AGGTGATACA TATGTACAAC ACGATGTAGA TGCATCTGTT TTTGGAGATA AAATCGGACA AATACCTAGA ATGGATGTTT ATGATTTTAA AGCTGATGAG AAATTATTAA ACTTAGCAAA AGAGGCTGCA AAAAATGTTC CAGAGGTTAA AACTTATGTA GGAAGAATAG TATCTGGAGA CCAATTTATT GCAGATAGTA ATAAAGTTAA AGTATTAGAT GAAGAGTTTA ATGCTAAGGC TGTTGAAATG GAAAGTGCAG CTATAGCTCA AGTTGCATAT CTTAATAAAA TTCCATTTGT AATAATACGT TCAATATCAG ATAATGCTAA TAATGGGGCT CACATGGATT ATAAAGAATT TATACCTGTG GGAGTTAAAA ATTCAACATC AATACTAAAA TCAATGTTTG AAAATATGTA A
|
Protein sequence | MNILKKTTSV LLAILITSFS LIACESKKNV EASKEENTIG IIGAMNEELE VLLKDMKNQK EVKRNDLTFY EGDLWGQHVV AVVSGVGKVN AASCTQILAS EFNVKSLINI GVAGGVSKDI YPGDIVIGDT YVQHDVDASV FGDKIGQIPR MDVYDFKADE KLLNLAKEAA KNVPEVKTYV GRIVSGDQFI ADSNKVKVLD EEFNAKAVEM ESAAIAQVAY LNKIPFVIIR SISDNANNGA HMDYKEFIPV GVKNSTSILK SMFENM
|
| |