Gene CPF_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1305 
SymbolmtnN 
ID4202538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1483031 
End bp1483831 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content30% 
IMG OID638082186 
Product5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 
Protein accessionYP_695751 
Protein GI110799423 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00324691 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATATAT TAAAAAAGAC AACAAGTGTA TTATTAGCTA TATTAATTAC AAGTTTTAGC 
TTAATTGCAT GTGAAAGCAA GAAAAATGTA GAAGCATCTA AGGAAGAAAA TACTATAGGA
ATCATAGGTG CTATGAATGA AGAACTAGAA GTACTTCTTA AGGATATGAA AAATCAAAAG
GAAGTAAAAA GAAATGATTT AACTTTTTAT GAGGGAGACT TATGGGGTCA ACATGTTGTA
GCTGTTGTAT CAGGAGTAGG AAAAGTTAAT GCAGCTTCAT GTACTCAAAT ATTAGCAAGT
GAGTTTAATG TTAAATCTTT AATAAATATA GGGGTTGCTG GAGGAGTATC TAAAGATATA
TATCCAGGAG ATATAGTTAT AGGTGATACA TATGTACAAC ACGATGTAGA TGCATCTGTT
TTTGGAGATA AAATCGGACA AATACCTAGA ATGGATGTTT ATGATTTTAA AGCTGATGAG
AAATTATTAA ACTTAGCAAA AGAGGCTGCA AAAAATGTTC CAGAGGTTAA AACTTATGTA
GGAAGAATAG TATCTGGAGA CCAATTTATT GCAGATAGTA ATAAAGTTAA AGTATTAGAT
GAAGAGTTTA ATGCTAAGGC TGTTGAAATG GAAAGTGCAG CTATAGCTCA AGTTGCATAT
CTTAATAAAA TTCCATTTGT AATAATACGT TCAATATCAG ATAATGCTAA TAATGGGGCT
CACATGGATT ATAAAGAATT TATACCTGTG GGAGTTAAAA ATTCAACATC AATACTAAAA
TCAATGTTTG AAAATATGTA A
 
Protein sequence
MNILKKTTSV LLAILITSFS LIACESKKNV EASKEENTIG IIGAMNEELE VLLKDMKNQK 
EVKRNDLTFY EGDLWGQHVV AVVSGVGKVN AASCTQILAS EFNVKSLINI GVAGGVSKDI
YPGDIVIGDT YVQHDVDASV FGDKIGQIPR MDVYDFKADE KLLNLAKEAA KNVPEVKTYV
GRIVSGDQFI ADSNKVKVLD EEFNAKAVEM ESAAIAQVAY LNKIPFVIIR SISDNANNGA
HMDYKEFIPV GVKNSTSILK SMFENM