| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1248 |
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| Symbol | truA |
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| ID | 4202906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1421265 |
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| End bp | 1422011 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082129 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_695694 |
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| Protein GI | 110800554 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAATA TAAAAATTAC TTTAGATTAT GATGGGAGTA AGTACAAGGG ATGGCAAAAG
CAAAACCAAA AGGGAAGTAA TGTTTCCACA GTTCAAGATA AATTAGAAAA AGTACTAACT
AAAATGACTA GTGAAGAGAT TCAACTAATT GGTTGTGGAA GAACTGATAG TGGTGTACAT
GCAAAAAATT ATGTAGCAAA TTTTAAGACA AATTCTCTTA TGACTCTAGA ACAAATTATT
GAATACATAA ATGAATATTT ACCTGAAGAT ATAAGGGTAA AGGAAATAAG AGAAGCAAGT
GAAAGATTTC ATGCTAGATT TAATGTTAAG TCTAAAACTT ATGAATATAC TATTGATAAC
AATAAGTTCA AAGATGTATT TTTAAGAAAA TATGCATGGC ATGTTGAAGA AAAGTTAGAC
CTAGAAGCTA TGGAAGAAGG AGCAAAATAT TTATTAGGCA CTCATGACTT TAAGAGTTTT
ACAAGTTTAA AATCAAAGAA CAAATCAACT TTAAGAACCA TAAATAGCAT TGAATTTCAT
GAAAATAATA ATATATTAAG TATAAAGATA AATGGAAATG GCTTCTTATT AAATATGGTT
AGAATAATAG TAGGAACTTT AGTAGATGTA GGACTTGGAA AAATTGAACC AAAATATATA
AATGATATAC TTGAAGCGAA GGAAAGAGCA AAAGCTTCAG AGAAAGCACC AGCTCATGGA
CTTTGTCTTT TAGAATTAAA TTATTAA
|
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| Protein sequence | MRNIKITLDY DGSKYKGWQK QNQKGSNVST VQDKLEKVLT KMTSEEIQLI GCGRTDSGVH
AKNYVANFKT NSLMTLEQII EYINEYLPED IRVKEIREAS ERFHARFNVK SKTYEYTIDN
NKFKDVFLRK YAWHVEEKLD LEAMEEGAKY LLGTHDFKSF TSLKSKNKST LRTINSIEFH
ENNNILSIKI NGNGFLLNMV RIIVGTLVDV GLGKIEPKYI NDILEAKERA KASEKAPAHG
LCLLELNY
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