| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1246 |
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| Symbol | sdhA |
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| ID | 4201409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1419378 |
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| End bp | 1420256 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638082127 |
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| Product | L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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| Protein accession | YP_695692 |
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| Protein GI | 110800733 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0490782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAGTTG CAAAAACTGG AGAAGAACTT TTAGCTATAT GTAAAGAAGA AGGGATTAAG
CTTAGTGAAT ATGCCTTAAG ATGTGAAATG AAAAGTAAAA ATCTTTCTAA AGAAGAAGTT
TTAGAGAAAC TTTCAAAAAC TTTAGAGGTT ATGAAAAAAT CATCATCAAA AGGAAGAGAA
GAAGAAGTAT ATTCACTTAG TGGATTAATA GGAGGAGATG CTTTTAAACT TCAAAAGTAT
TTAGAATCTG GAAAATCTTT CACAGGTAAT GGAGCTATAT TAGCTATGGC TATGGCTATT
TCTTCATCTG AAGTAAATGC TTCTATGGGA AAAATAATTG CTTGTCCAAC AGCAGGTTCT
TGTGGAATTC TTCCTGCGGT AATGTTAACA GCTAAGGAAA GATTAAATCT TCAAGATGAA
GATTTATTAT ATGGACTTTT AGCAGCATCA GCTATTGGAC TTATAATTGG GAAAAATGCT
ACATTTTCAG GAGCAGAAGG TGGATGTCAA GCAGAATGTG GCTCAGCATC TGCCATGGCA
GCTGGTGCCC TTGTAGAACT TATGGGAGGG ACACCAGAAA TGTCATTAAA TGCCGCTGCA
ATAGTAATAA AGAATATATT AGGTCTTGTT TGTGATCCTG TTGCAGGTCT TGTTGAAATT
CCTTGTGCTA AAAGAAATGC TTCAGGTGCC GTAAATGCTA TATGTGCAGC AGATCTTGTA
ATGGCTGGAA TAGAATCAAA AATACCTTTT GATGATACAG TAAGTGCTAT GGCTCAAGTT
GGAAAGGCTC TTCCAGAGAC CTTAAGAGAA ACAGCACTTG GAGGAGTAGC TATTACAAAA
ACAGGGCTTA TGTTGAAGAA AAAAGTATTC GATAAGTAA
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| Protein sequence | MRVAKTGEEL LAICKEEGIK LSEYALRCEM KSKNLSKEEV LEKLSKTLEV MKKSSSKGRE
EEVYSLSGLI GGDAFKLQKY LESGKSFTGN GAILAMAMAI SSSEVNASMG KIIACPTAGS
CGILPAVMLT AKERLNLQDE DLLYGLLAAS AIGLIIGKNA TFSGAEGGCQ AECGSASAMA
AGALVELMGG TPEMSLNAAA IVIKNILGLV CDPVAGLVEI PCAKRNASGA VNAICAADLV
MAGIESKIPF DDTVSAMAQV GKALPETLRE TALGGVAITK TGLMLKKKVF DK
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