| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1242 |
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| Symbol | |
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| ID | 4202897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1413590 |
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| End bp | 1415098 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082123 |
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| Product | putatve dicarboxylate transporter |
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| Protein accession | YP_695688 |
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| Protein GI | 110800545 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1288] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0072618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA AGAAAAAAAT TTCGTTCCCT ACAGCCTTTA CTGTATTATT TATTGTTTTA
ATTTTATCAG CTGTTTTAAC TTATGTGATT CCAGCAGGAT CATATTCAAA GTTGTCTTAT
AATGAAGCTG AAAATACCTT TATTGTTACA AATCCTCAAG GGGAAAGCAC TAAGGAAGCT
GCAACCCAAA ATACCTTAGA TAAACTTGGT ATAAAAATAG ACTTAAGTAA ATTTACTGAT
GGAAGTATAA ATAAGCCAAT AGCTATACCA AATACTTATG AAAAGGTTGC TCAAAATCCT
CAAGGTATTG CTCAAATAAT AGAAGCTCCT ATTCAAGGAA CTTATGACAC TATAGATATA
ATTATGTTCG TTTTAATAAT TGGTGGAGTA ATAGGAGTTT TAAATACAAC TGGAGCATTT
AATGCTGGAA TTGCTAGCCT TTCTAAAATA ACTAAGGGAA AAGAATATAT ACTTATAATA
TTATTATCAA TACTTATTTC TCTTGGTGGT ACTACTTTTG GATTGGCAGA AGAAACAATT
GCTCTTTATC CAATTCTGCT CCCAATCTTC CTAGCTTCTG GCTATGATGC TATAGTTTGT
ATAGCCACAA TATACATGGG TTCATCTATA GGAACAATGT TCTCAACTGT AAACCCATTC
TCTTCAGTAA TAGCTTCAAC AGCTGCTGGA ATAAGCTTTA AAGAAGGCCT TGATTTTAGG
ATGATAGGAT TAGTTTTAGC TACACTTATA ACAATAATTT ATATACTTAG ATATGCTAAA
AAAGTTAAAA ACGATCCTTC TAAATCCCTT GTATATGATC AAAAAGATGA AATAGATTCT
AAATTCCTTC ATGAATCTAG TAATGATGTG CCAGTATTTA CTTGGAGACT TAAACTTATG
CTTTTAATCT TCGCTGGTTC ATTTATAATT TTAGTTTATG GAGTTTCAGC TAAAGGATGG
GGATTTATAC AAATGACTGC TCTATTCCTT GTAGTTGGAA TAATTTTAGG ATTCCTTTCA
GGACTTGGAG AAAAGAAATT TGTTAATACC TTTATAGCTG GTGCTGCTGA TTTAGTAGGA
GTTGCCTTAG TTATAGGTGT TGCAAGATCT ATAAACTTAA TACTTGAAAA TGGTAAAATA
TCAGATACTT TACTTTATGT ATCCTCAAAT GGAATTCAAG GTATGGATAA AAATATATTT
ATAATATTAA TGCTTGTTAT ATTCATAATC TTAGGATTCT TTATTCCATC TTCATCTGGT
CTTGCTGTTT TATCAATTCC AATAATGGCA CCACTTGCAG ATACAGTTGG TTTACCAAGG
GATGTTATAG TTAGTGCTTA CCAATTTGGT CAAGGATTAA TCTCCTTTAT AACTCCAACA
GGATTAATTT TAGCTACCCT TGCTATGGTT GATGTAACCT ATAATAAATG GCTGAAATTT
ATTATGCCTT TAATGGGAAT TATAGCAGCC TTTGCAGCCT TACTATTATT AGTACAGGTA
CACTTTTAA
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| Protein sequence | MSKKKKISFP TAFTVLFIVL ILSAVLTYVI PAGSYSKLSY NEAENTFIVT NPQGESTKEA
ATQNTLDKLG IKIDLSKFTD GSINKPIAIP NTYEKVAQNP QGIAQIIEAP IQGTYDTIDI
IMFVLIIGGV IGVLNTTGAF NAGIASLSKI TKGKEYILII LLSILISLGG TTFGLAEETI
ALYPILLPIF LASGYDAIVC IATIYMGSSI GTMFSTVNPF SSVIASTAAG ISFKEGLDFR
MIGLVLATLI TIIYILRYAK KVKNDPSKSL VYDQKDEIDS KFLHESSNDV PVFTWRLKLM
LLIFAGSFII LVYGVSAKGW GFIQMTALFL VVGIILGFLS GLGEKKFVNT FIAGAADLVG
VALVIGVARS INLILENGKI SDTLLYVSSN GIQGMDKNIF IILMLVIFII LGFFIPSSSG
LAVLSIPIMA PLADTVGLPR DVIVSAYQFG QGLISFITPT GLILATLAMV DVTYNKWLKF
IMPLMGIIAA FAALLLLVQV HF
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