Gene CPF_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1235 
Symbol 
ID4202916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1404332 
End bp1406329 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content28% 
IMG OID638082116 
Productpotassium transporter 
Protein accessionYP_695681 
Protein GI110799176 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000105426 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTA ATAAAAGTTC TATTGAAAAA ATTACTTTAG GAAGCTTTTT AATAGCCTTA 
GGAGTTGTTT ATGGAGATAT TGGAACTTCT CCTCTTTATG TTATGAAATC AATAATAAAT
GGCAATGGAG GTTTAGAAAG CATTACTCCT GATTTTATCC TTGGAGTATT ATCTCTTATT
TTTTGGACTA TGACTTTATT AACAACAATA AAGTATGTTC TTATAACATT AAAGGCTGAT
AATAAGGGAG AAGGAGGTAT ATTTTCTCTT TATACCTTAG TTCGTCGTCG TGCTAAGTGG
CTTATTATCC CTGCCATGGT AGGAGGTTCT GCTCTGCTAG CTGATGGAAT GCTAACCCCA
GCAGTAACTG TTACTTCATC CATTGAAGGT TTAAAAATCT TGCCTAGTTT TAATGATATA
TTTGGAAATA ATCAAGATAT AATTATAATC ATTGTACTAG TAATACTAAG TTTTTTATTC
TTTATTCAAC ATTTTGGTAC AGAAATAATA GGTAAAATCT TTGGACCAGT TATGTTTATT
TGGTTTGCAT TTTTAGCCAT ATTAGGAATT GTAAATTTAT CAGGAAATTT GTATCTTTTA
AAAGCACTTT CTCCTCATTA TGCAATAAAA ATTTTATTTA GTCCAAATAA TCATTTAGGT
TTTTTTATTC TTGGAGGAGT ATTTTTATCA ACAACTGGAG CTGAAGCTTT GTACTCTGAT
CTTGGTCATG TTGGTAGAAA GAATATCTAT CTTACTTGGC CTTTAGTTAA AATATGCTTA
CTATTAAATT ATTTTGGTCA AGCTGCTTGG ATATTATCAC AAAAAAATAA TACTAAATTA
TATGGAATTG AAAGCTTAAA TCCATTTTTT CAAATGATGC CTAGTTGGCT TTTACTATTT
GGAGTTTTAA TTTCTACATT AGCAGCTATT ATAGCATCTC AAGCTTTAAT TTCAGGTTCA
TATACCTTAG TTTCAGAAGC TATTAAATTG AATTTATTCC CTAGATTACA ATGTCTTTAC
CCTTCTAATT CTAAGGGACA AATTTACATG CCAGCTATAA ACAGAATACT TTGGATAGCT
TGTATAGCTA TAGTTTTATA TTTTAGAAGT TCAGATAATA TGGAAGCAGC TTATGGATTA
TCAATAACTG TAACAATGCT TATGACATCC ATACTTTTAT TCAATTATCT ATTAAAAATA
AAAACTCCAT TACCAATTGC ACTAATTATA CTAGTCTTCT TTGGCTCTTT AGAATTTTCA
TTCTTAATTT CAAGTGCAGT TAAATTCGAA AAAGGTGGTT TTGTTTCAGT ATTAATAGCT
TTATGTATTT TAAGCATAAT GTATATATGG ATAAAAGGTC ATTATATAAA AATGAGTCTA
TTAGACTATA TTCCTATTGA AAATTATAAA AATCAATTAA AAGAATTAAA GAATGATGTA
GATAGACCTA AATATGCAAC AAATCTTGTT TATTTAACAA GTTCAGAAAA ATCCAAAAGA
ATAGAAAGAA AAATAATGTA TTCTATATTA GATAAAAGGC CTAAAAGAGC AGATGTATAT
TGGTTTGTAA ATGTAATTGT AACTGATGAA CCCTATACAG CTGAATATAC TGTAAATACA
TTTGGCACTG ATTATATGGT TAAGGTGCAA CTTAAACTTG GTTTTAGGGT TAACCAAAAA
CTAAATGTAT TTTTACGTCA AATAGTATGT GAACTTATAA ATAATGGTGA TATTAAGGTT
CAAAATAGAA AGTATACTAC ACTTCCTAAC AGAAATGTAG GAGATTTCAG ATTTATTCTT
ATAAATGAAT GTTTATCATC AGAAAGCAAG CTTAAATCAT GGAATTCAAT GATAATTAAA
GCTAAGCTTT TCATAAAAAA ATTCACAGTT TCTCCAGCTA AATGGTTCGG CCTTGAATCT
AGTGAAATTG AAATTGAAAA TGTTCCTTTA ATATTAGGAT CTACTGAACA CACTACTTTA
AAACGTGTTT ATAAATAA
 
Protein sequence
MSTNKSSIEK ITLGSFLIAL GVVYGDIGTS PLYVMKSIIN GNGGLESITP DFILGVLSLI 
FWTMTLLTTI KYVLITLKAD NKGEGGIFSL YTLVRRRAKW LIIPAMVGGS ALLADGMLTP
AVTVTSSIEG LKILPSFNDI FGNNQDIIII IVLVILSFLF FIQHFGTEII GKIFGPVMFI
WFAFLAILGI VNLSGNLYLL KALSPHYAIK ILFSPNNHLG FFILGGVFLS TTGAEALYSD
LGHVGRKNIY LTWPLVKICL LLNYFGQAAW ILSQKNNTKL YGIESLNPFF QMMPSWLLLF
GVLISTLAAI IASQALISGS YTLVSEAIKL NLFPRLQCLY PSNSKGQIYM PAINRILWIA
CIAIVLYFRS SDNMEAAYGL SITVTMLMTS ILLFNYLLKI KTPLPIALII LVFFGSLEFS
FLISSAVKFE KGGFVSVLIA LCILSIMYIW IKGHYIKMSL LDYIPIENYK NQLKELKNDV
DRPKYATNLV YLTSSEKSKR IERKIMYSIL DKRPKRADVY WFVNVIVTDE PYTAEYTVNT
FGTDYMVKVQ LKLGFRVNQK LNVFLRQIVC ELINNGDIKV QNRKYTTLPN RNVGDFRFIL
INECLSSESK LKSWNSMIIK AKLFIKKFTV SPAKWFGLES SEIEIENVPL ILGSTEHTTL
KRVYK