| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1233 |
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| Symbol | |
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| ID | 4201081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1401770 |
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| End bp | 1403710 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082114 |
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| Product | putative tetracycline resistance protein |
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| Protein accession | YP_695679 |
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| Protein GI | 110800811 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.139219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAGA CTATTGGTAT ATTAGCTCAT GTTGATGGAG GAAAAACCAC TTTTTCTGAG
CAACTTTTAT ATCATACAAA GAGTATAAGA AATAGAGGAA GAGTTGATCA TAAAAATTCT
TATTTAGATA ATAATGAAAT AGAGAGGGAT AGGGGGATAA CTATATATTC TGAGGTGGGG
AAATTTTCTA TAGAAAATCA AGAATATTAT CTTATAGATA CTCCAGGGCA TATAGATTTT
TCACCAGAAA TGGAAAGAGC TATTAGTGTT TTAGATTATG CTATTTTGAT TATAAGTGCA
GTAGAAGGGG TTCAGGGACA TAGTGAAACA ATATGGGAAT TATTAAATAA GTATAAGGTT
CCTACTTTTA TTTTCATAAA TAAGATTGAT AGAGAAGGAG CAGAAGTAAA TAAAGCTATA
AATGAAATGA AACACAAACT TAGTGAAGAT ATTATTTTCT TTTCAAGTAA ACTAGAGGAG
GGGACTATAG AAGAAGTAGT TGAAAGCGAT GAGGACTTAC TAAACTTATA TTTAGAAGGA
AATTTAAGTG AAGAAGAATT ATTAAATAAA ATACCAAGCA TGATAAAGGA ACTTAAAATT
TTTCCTTGCT TATGTGGTTC TGCTTTACTA GATGAGGGCA TAGAAGATTT TATAAGGTGG
TTTCACAACT TATCATTTAC TAACTATGAG GAAAGAGAAG ATTCTTTTAG AGGAAGAGTT
TTTAAAGTAA GACATGATGA AAAGGGAAAT AGATTAACTT TTATAAAAGC TCTAAGTGGA
ACTTTAAGAA CTAAGGAAGA ATTGACATAT TTAAAAGAAG GAAAAGAGTC TTTAGAGAAA
GTAAATGAAG TTAGAATATA TAATGGAAGT AAATATGAAC TTGTAAATGA AGTCAGGGCA
GGAGATATAT TTGCGGTGGT AGGAGTTAAA GGACTAGAAT CAGGTGATGG GATTGCTATA
GAAAATATTG ATTCATATGA TATGATTCCT ACTTTGAAGT CTAAGGTGGT TTATAGAGAA
GGGTTAAATC CAAAGGAAGT ACTTTCATGG TTTAAAATTT TAGAAAGTGA AGAGAGTACT
TTAAGTGTAT CTTGGGATGA AAGATTAAAA GAAATTCACG TTAATATTAT GGGAAAAGTT
CAATTGGAAG TTCTTAAAGA AGTTATGAAA AATAGATTTA ATGAAGAAAT AGAATTTGGA
ACTCCAGAGA TATTATATAA GGAAACATTA AATGAAGAAG TGATAGGATA TGGCCATTTT
GAGCCTTTAG GACATTATAG TGAGGTTCAC TTAAAAATTG AGCCTGGGGA AAGAAATTCA
GGAGTAGTAT TTGAAAATAA GTGCCATGCA GATGATCTTA CACCAGGAAA TCAAAATTTA
ATAAGGACTC ATATATTTGA ATGTGAGCAT AAGGGAATAT TAACAGGTTC GCCTATTACG
GATCTTAAAA TAACCTTATT AACAGGAAGA GCTCACAATA AACATACAAG TGGTGGAGAT
TTTAGAGAAG CTACCAAGAG AGCTTTAAGA CAGGGATTAG AAAGTGGGGA AAATAAACTT
TTGGAGCCCT ATTATAAGTT TAAAATAGAT GTGGATCTTA ACCTAATAGG AAGAGTAATG
AATGATATAC AAAGGATGAA TGGAGAGTTT AAGGATCCTA TTATAGATGG AGAGAGAGCA
ACCATAGAAG GAAAGGGGCC TGTTTCTACA TTTACAAATT ATGGTATGGA GTTTCAGTCA
TTTACTAAGG GAAAGGGAGG ACTTTCTCTT AAGTTTCATG GGTATGATTT ATGTCATAAT
GAAGAAGAGA TTATTGAAAA GAGGGCATAT GATAGAAATG CAGACATTGA TTATACTTCT
ACTTCTATAT TTTGTTCAAA GGGTCAAGCT TATTTAGTTA AAGGAGAAGA GGCAAAAGAA
CATATGCATT GTTTAGTTTA G
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| Protein sequence | MKKTIGILAH VDGGKTTFSE QLLYHTKSIR NRGRVDHKNS YLDNNEIERD RGITIYSEVG
KFSIENQEYY LIDTPGHIDF SPEMERAISV LDYAILIISA VEGVQGHSET IWELLNKYKV
PTFIFINKID REGAEVNKAI NEMKHKLSED IIFFSSKLEE GTIEEVVESD EDLLNLYLEG
NLSEEELLNK IPSMIKELKI FPCLCGSALL DEGIEDFIRW FHNLSFTNYE EREDSFRGRV
FKVRHDEKGN RLTFIKALSG TLRTKEELTY LKEGKESLEK VNEVRIYNGS KYELVNEVRA
GDIFAVVGVK GLESGDGIAI ENIDSYDMIP TLKSKVVYRE GLNPKEVLSW FKILESEEST
LSVSWDERLK EIHVNIMGKV QLEVLKEVMK NRFNEEIEFG TPEILYKETL NEEVIGYGHF
EPLGHYSEVH LKIEPGERNS GVVFENKCHA DDLTPGNQNL IRTHIFECEH KGILTGSPIT
DLKITLLTGR AHNKHTSGGD FREATKRALR QGLESGENKL LEPYYKFKID VDLNLIGRVM
NDIQRMNGEF KDPIIDGERA TIEGKGPVST FTNYGMEFQS FTKGKGGLSL KFHGYDLCHN
EEEIIEKRAY DRNADIDYTS TSIFCSKGQA YLVKGEEAKE HMHCLV
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