Gene CPF_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1224 
Symbol 
ID4201804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1393308 
End bp1394303 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content21% 
IMG OID638082105 
Producthypothetical protein 
Protein accessionYP_695670 
Protein GI110799235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000979251 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAGCA GAGTTAATAA AATAAATAAT CGTACAGTTG CTGCTTTAGG AATAAAAAGT 
TTAGATGAAA ATTTAGAGAA AAGTATAGTT AATATAATAA ATTGTAATCC AGAATATATT
ATTTTAGGGT GTAGTGAAAT TCCTTTTACA GAAAGAATTT TGAAAGCTTT AAACAATGCT
AATTGTCCTA AGATTTTAAT ACTTACCTTT AACTATAGGT TTAGAAATCA AAGAGAGATA
GTTAATGAAA TTAAATTTAT GAAAAATTTC CCTGAAAATA ATATAGCAAT TATATTAAAT
TCAGTAAATG ATTCTAATTT TATCTTAACG GATAAAATTT GTTATGTATC TTCAGGAAGT
TTAAATAATA ATGGTATAGC AAACAATGTA AATTCCTATG AAATAATGAA TGACAAAGAT
TGTAATTATA AATTATGGGA ATCAGAAATC TTTGATTTTA TAAATAAAGA AATAATAAAT
TACAGGAGTA ATAATCAAAG GGAGCAAATA GAATACATTT TAAAGGAACT TAAAAAAAGG
TTGTTTATCA ATATTTCTAA TAATTCCAAT ATATTAAATG AGGAGTATAT ATACATTCTT
CTAGATATAT TAAATAGCAT AGATAGATTT ATTATGATAG GAACTGATGT TTATCAATAT
TTTGATAGGG ATTTTTTAGA CATAATAAAG AGTAATAAAA AAATATTAGC TAAAATAAAT
TCCATAAGAA ATGAATTATT TAGAATACTT TTAAACATCA ATGAAGGAAA GAATGATATT
AATAACAAGA TTTTTAATTG CTTAAAAAAT GAATTTTTAG TTCTTTTAGA AGAATTAGAG
GAGTTAATAA ATTTAAGAGA AAATAAATAT CATAATTCTA TTATGTCATG GAGAAAGGAT
GAAAGTATAA GCTCATTTTT ATCAGCTAAT AATACAATTA ATAATTCTTT GATTAGGAAA
TTCTATGAAA GAATTATTTT AAATTGTGAA AGATAA
 
Protein sequence
MRSRVNKINN RTVAALGIKS LDENLEKSIV NIINCNPEYI ILGCSEIPFT ERILKALNNA 
NCPKILILTF NYRFRNQREI VNEIKFMKNF PENNIAIILN SVNDSNFILT DKICYVSSGS
LNNNGIANNV NSYEIMNDKD CNYKLWESEI FDFINKEIIN YRSNNQREQI EYILKELKKR
LFINISNNSN ILNEEYIYIL LDILNSIDRF IMIGTDVYQY FDRDFLDIIK SNKKILAKIN
SIRNELFRIL LNINEGKNDI NNKIFNCLKN EFLVLLEELE ELINLRENKY HNSIMSWRKD
ESISSFLSAN NTINNSLIRK FYERIILNCE R