| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1214 |
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| Symbol | kdpE |
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| ID | 4202176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1379302 |
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| End bp | 1380015 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082095 |
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| Product | DNA-binding response regulator KdpE |
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| Protein accession | YP_695660 |
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| Protein GI | 110798945 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000130813 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCAG CAATTTTAGT TATTGAAGAT GAAAAAGCCA TAAGAAATTT TGTAACAGCT
ACATTAGAAA TAAATTCATA CAAGTGTCAT ACGGCTTTTA ATGGTTCACA AGGAATGATT
TTAGCAATAT CAAAAAGACC AGATATTATA ATACTAGATT TGGGACTACC TGATATGGAT
GGCATAGAAA TAATTAAAAA AGTAAGAGAA TGGTCAAATT GTCCAATAAT TGTAGTTAGT
GCAAGAAGTG AAGATAGAGA TAAAATTGAA GCTTTAGATT TAGGAGCTGA TGATTATTTG
ACTAAACCAT TTAGTGTAGA TGAGTTAATG GCTAGAATAA GAGTTGCTAT AAGAAAAATG
AACTATGATA GAAATAATAC ACAGGAAATA CAAGAGTTTG TAAATGGAGA CTTAAAAATT
GATTATACTT CAGGATGTGT ATTTTTAAAT GAAGAAGAGA TACATTTAAC TCCAATTGAA
TATAAATTAC TATGTTTACT TTCTAAAAAT GTTGGAAGAG TTCTTACTCA CAATTATATA
TTAAAAGAAA TTTGGTCTAG CACTTGTGAA AGTGATATTC CTTCATTACG AGTTTTTATG
GCAACTTTAA GAAAAAAATT AAGCAAAAAG GCTATGGATA CAAATTATAT ACAAACCCAT
ATAGGGGTTG GATATAGGCT ACTTAGAATT CAAGATAAGG ATAGTGAACT TTAA
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| Protein sequence | MKPAILVIED EKAIRNFVTA TLEINSYKCH TAFNGSQGMI LAISKRPDII ILDLGLPDMD
GIEIIKKVRE WSNCPIIVVS ARSEDRDKIE ALDLGADDYL TKPFSVDELM ARIRVAIRKM
NYDRNNTQEI QEFVNGDLKI DYTSGCVFLN EEEIHLTPIE YKLLCLLSKN VGRVLTHNYI
LKEIWSSTCE SDIPSLRVFM ATLRKKLSKK AMDTNYIQTH IGVGYRLLRI QDKDSEL
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