Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1199 |
Symbol | |
ID | 4203068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1364004 |
End bp | 1364669 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082080 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_695645 |
Protein GI | 110799273 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0191254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAATTC AATGCAAAGA TATAAAGAAA ACATTTAAGG TTGGAGATAC TTCTGTTGAA ATTCTAAAGG GAATAAGTTT AGAAATTAAT AAGGGGGAAT TTACTGCAGT TATAGGAGAG TCAGGATCAG GAAAATCTAC ATTTTTAAAT ATTTTAGGAG GTATAATGCC TTGTGATGAA GGAGAAATAG TAATAAATGA ACATCATATT GAAGGCTTAA ATGAAAATGA ATTAGCTTTA TTTAGAAGAA AAAATATGGG GTTTATATTT CAAAGTTATA ATTTAATGCC TCAACTTACA GCTTTAGAAA ATGTAGAGAT GCCACTAATT TTTTCAGGAG TTTCTAAAAA GGAAAGAATA GAAAGAGCAA AATTAATGCT AGAAAAGGTT GGATTAGCTG ATAGGATGAA TCATAAACCA TCAGAATTAT CAGGGGGACA ACAACAAAGA GTATCTATAG CAAGAGCTTT AATAAATAAT CCAAGTGTAA TACTAGCTGA TGAGCCTACG GGGAATTTAG ATAGTAAGAC TACCATAGAA ATTTTAGATT TATTAAAGGA TTTAAATAAA AATTTTAATA CAACTTTTGT TGTGGTAACT CATTCACAAG TGGTTTATGA ATACGCAGAT AGAGTTATAA AAATGGAAGA TGGTCTTCTT TGCTAA
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Protein sequence | MIIQCKDIKK TFKVGDTSVE ILKGISLEIN KGEFTAVIGE SGSGKSTFLN ILGGIMPCDE GEIVINEHHI EGLNENELAL FRRKNMGFIF QSYNLMPQLT ALENVEMPLI FSGVSKKERI ERAKLMLEKV GLADRMNHKP SELSGGQQQR VSIARALINN PSVILADEPT GNLDSKTTIE ILDLLKDLNK NFNTTFVVVT HSQVVYEYAD RVIKMEDGLL C
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