| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1195 |
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| Symbol | hpkA |
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| ID | 4201146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1360293 |
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| End bp | 1361198 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638082076 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_695641 |
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| Protein GI | 261876167 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000111756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGAAGGAT TTATAATAGG ATTGTCTTTG ACAATCCTTA TTGTGCTTTT AATAATATTT
ATTTTAAAAA CTAAAGAAAT AAATAGATTA ACCTTGGAGT TAAAAAAGTT AAATAGTGAG
GGGAAAATAG AAAAATTAAG ATTATCACTT CCAAATAAAA ATATTGAAAA TTTAATAGTA
GAGATAAATA CATTAATAGA TGATAAAAGA AAAATGGAGA ATATTTATAA GGAAAAGGAT
ATGGAGTTAA GAGAAGCCAT TGCAAATATG TCTCATGATT TAAGAACTCC TTTAACTTCT
ATAATGGGAT ATGTTTATTT ATTAAATGAT GATAAATTAG ATAAAGAGGA AAGAAAAGAA
TATTTAAAAA TAATAGAAAA AAGATCTTTA GTTTTAAATG ATTTAATAAC TAATTTTTAT
GGACTATCTA GAATACAAGC AGATCAGTAT GAAATTAAAC TTGAACCTGT TAATTTAGAA
TTAGTCTTGG GTGAAATTAT TGCGGCTTTT TATGAAACCT TAGATTATAA ATTTGGAGAA
CCAGAAATTA ATATTGAAGA GGGCTTAGGA CCTGTATTAG GTGATAAACA GGCTTTAAAT
AGAATATTTA CTAATTTAAT TGAAAATATC ATAAAGCATG GTGAAGGGGA AGTAAAAATA
TCCTTAAAGA AGAAAAATAA ATACATAGTA ATGGAGTTTT CTAATAAAGC AGAAGAATTA
GAACCTAAGG ATGTAAATAG AATCTTTGAA AAGTTCTTTA CTAAGGATAG AATGAGAACA
GGGCAAAATA CTGGCTTAGG GCTAGCCATA GTTAAACTAT TAGTAGAAAA GCAAGGACAA
AAGATAGAGG CTAAAAAGGT TGGAAATAGG CTTGTTATAA ATATAATATG GAGTTTAGAA
AGTTAA
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| Protein sequence | MEGFIIGLSL TILIVLLIIF ILKTKEINRL TLELKKLNSE GKIEKLRLSL PNKNIENLIV
EINTLIDDKR KMENIYKEKD MELREAIANM SHDLRTPLTS IMGYVYLLND DKLDKEERKE
YLKIIEKRSL VLNDLITNFY GLSRIQADQY EIKLEPVNLE LVLGEIIAAF YETLDYKFGE
PEINIEEGLG PVLGDKQALN RIFTNLIENI IKHGEGEVKI SLKKKNKYIV MEFSNKAEEL
EPKDVNRIFE KFFTKDRMRT GQNTGLGLAI VKLLVEKQGQ KIEAKKVGNR LVINIIWSLE
S
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