Gene CPF_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1174 
Symbol 
ID4201183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1340322 
End bp1340888 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content32% 
IMG OID638082055 
Productcoenzyme B12-dependent glycerol dehydratase, medium subunit 
Protein accessionYP_695620 
Protein GI110800527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.145857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA GAACTTTTAT ACCAGAAATA ACAGTTGAAG AAGTTGGAGA AGCTAAGGTT 
GGTTTAAGAT CAGATGAAGT TGTTATAGGA TTAGCACCTG CATTTTTAAA ATATCAAAAT 
AAAACAATAG TAGATGTTCC TCATACTGAA ACTTTACTTG AAATCATAGC AGGTATCGAA 
GAAGAAGGAT TACATGCAAG AGTAGTTAGA ATTTTAAGAA CATCTGATGT ATCTTTTATA 
GCTCATGATG CAGCTTGTTT AAGTGGATCA GGAATAGGTA TAGGAATACA ATCAAAAGGT 
ACTACAGTAA TACATCAAAA AGATTTATTA CCATTAAATA ACTTAGAATT ATTCTCACAA 
GCTCCGCTTT TAACTCCAGA AACATATAGA TTAATCGGAA AAAATGCTGC TAAATATGCT 
AAAGGTGAGT CACCAACACC AGTACCAGTA AAAAATGACC AAATGGTTAG ACCTAAATTC 
ATGGCAAAGG CAGCTTTACT ACACATAAAA GAAACTAAAC ACGTTGAACC AGGTAAAAAG 
CCAGTTCAAT TAGAAGTTAA GTTTTAA
 
Protein sequence
MEERTFIPEI TVEEVGEAKV GLRSDEVVIG LAPAFLKYQN KTIVDVPHTE TLLEIIAGIE 
EEGLHARVVR ILRTSDVSFI AHDAACLSGS GIGIGIQSKG TTVIHQKDLL PLNNLELFSQ 
APLLTPETYR LIGKNAAKYA KGESPTPVPV KNDQMVRPKF MAKAALLHIK ETKHVEPGKK 
PVQLEVKF