| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1172 |
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| Symbol | |
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| ID | 4201408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1337554 |
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| End bp | 1338306 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638082053 |
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| Product | AraC family DNA-binding response regulator |
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| Protein accession | YP_695618 |
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| Protein GI | 110800732 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.409048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTAGCA TAATGGTTGC TGATGATGAA CAATTAGAAA GAAGAGTTTT AACCTCTATA
TTAAAAAAGA ATGTAAGAGT TAAAGAAATT ATTGAAGCAA AAAATGGAAA AGAAGCTTTA
GAATTAAATA GAGAATTTAA TCCAGATATA ATAATAATGG ATATAAAGAT GCCAGGAATA
AATGGAATTA AAGCCTTAGA GCTTATAAAA AATGAAAATC CTAACAAGGA AATAATAATG
CTTACAGCAT ATGATGATTT TGAGTTTATA CACAAAGTTT TAGTGTTAGG AGGATCGGAC
TACATAATAA AACCAATAAA ACCAGATAAA CTAATGGAAA TTGTTGATAA TATTATGGAT
AAGATTGAAA ATAAGAATAT AGAATTAGGA GTAAAAAGTC ATAGTGATGA AAAGACTCTA
GATAGAAACT TAACAAATGA AGAGAAAATA GTAGATAAGG TTTCTAAGTA TATTGATGAC
AATATGGATA AAATGCTGAA GTTAGAAGAA TTAGCTTCAA TCTGTAATTT AAGCCCAGGG
TATTTTAGTA GGGTTTTTAA AAAGGAAACT GGTAAAACCG TAATAACATA TATAAATGAG
AAAAAGGTAG AAAGAGCAAA GAAACTTTTA AAAGAAAGTA AAGACCCTAT AATAAATATA
TCCTTAGACT TAGGCTTTGA TGATTGTGGG TATTTTATAA GGGTATTCAA AAAGATAACA
GGCTTAACTC CTAAGGCCTT TAGAGAAGAA TAA
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| Protein sequence | MFSIMVADDE QLERRVLTSI LKKNVRVKEI IEAKNGKEAL ELNREFNPDI IIMDIKMPGI
NGIKALELIK NENPNKEIIM LTAYDDFEFI HKVLVLGGSD YIIKPIKPDK LMEIVDNIMD
KIENKNIELG VKSHSDEKTL DRNLTNEEKI VDKVSKYIDD NMDKMLKLEE LASICNLSPG
YFSRVFKKET GKTVITYINE KKVERAKKLL KESKDPIINI SLDLGFDDCG YFIRVFKKIT
GLTPKAFREE
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