| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1154 |
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| Symbol | |
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| ID | 4201527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1321433 |
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| End bp | 1322194 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082035 |
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| Product | 7-alpha-hydroxysteroid dehydrogenase |
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| Protein accession | YP_695600 |
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| Protein GI | 110799443 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000294561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTT TATCAAAAAG CATAAAAAAT AAGGTGGTTA TAGTAACAGG TGGTACTAGA
GGAATAGGAT TTGCTACTGT GAAAAAATTT CTAGACCATG GTGCTAAGGT TGCTTTATGT
GGTTCAAGAA AGGAAACTGT GGATAAAGCA TTAGAAGAAT TAAATCATAT TAATCCTAAT
TATGATGCAA TTGGATTTTA TCCTAACTTA TTAGATAGTA ATGAAGTAAA AGAAATGGTA
GATAAGGTTT TAGAAAAATG GGGAACTATA GATATACTTA TAAATAATGC AGGAGTTAGT
GATAATAAGT CAATATATAC CCAAAGTGAT GAGGATTTTT CAAAGATAAT TGATATTAAT
GTGAAGGCTA TCTTTAATTG CACCAAAGCT GTTTCAGAAA TAATGAAAAA TAAAAAATAT
GGAGTAATTT TAAATACTAG TTCTGTTGTA AGTTTATATG GACAAAAAAC AGGAGTAGGA
TATCCTACAT CTAAGTTTGC AGTAAATGGA TTAACAAAGT CTTTAGCAAG GGAACTTGGA
AAGGATGGAA TAAGAGTAAA TGCTGTAGCC CCTGGAATTA TTGCTACAGA TATGGTTGCT
GCTTTAGATA AGAAATTAGT AGATCAAATA GCTCAAAATG TACCTTTAGG AAGAGTTGGA
GAGCCAGAAG ACATAGCAAA TGCTTTCTTA TTCCTAGCCT CTGATATGGC AAGTTATATA
AGTGGAGAAA TATTATCTGT AGATGGTTCT GTAGTACTTT AA
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| Protein sequence | MDILSKSIKN KVVIVTGGTR GIGFATVKKF LDHGAKVALC GSRKETVDKA LEELNHINPN
YDAIGFYPNL LDSNEVKEMV DKVLEKWGTI DILINNAGVS DNKSIYTQSD EDFSKIIDIN
VKAIFNCTKA VSEIMKNKKY GVILNTSSVV SLYGQKTGVG YPTSKFAVNG LTKSLARELG
KDGIRVNAVA PGIIATDMVA ALDKKLVDQI AQNVPLGRVG EPEDIANAFL FLASDMASYI
SGEILSVDGS VVL
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