Gene CPF_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1150 
Symbol 
ID4202106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1315800 
End bp1316468 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content28% 
IMG OID638082031 
Producthypothetical protein 
Protein accessionYP_695596 
Protein GI110800342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000534211 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAG AAAGAAAAAA TAGTGGGATA ATATTTCTTA TATTTGGAGT TGTTTTTGTT 
TTAAACGCCT TAAATCCAGT AATGGAGTTA CTGTATATTA AAGCTAAGGG AGAAATTGCA 
GAGGCAAAAA TAGTTGCATA TGATTTTATT CAAAGAAGTA GCAGAAGTGG ACGAGGGAGT 
TCTTATAAGT ATATCCCTAT AATTGAATTT TTTGATGGAA AGGAAATTGT ACAGGTTCCT 
GTAACAATGA ATTCCTTAAA TGAAGAATTA GATATAATAG GATTAGATGT TAAGGTTAGT 
TACTTGAAAA ATACTCCATC TAAGGTAATA ATAGATGATA AACTATTTTG GTTATATGAG 
ATATCTAATT CTTTAGTAGT TGTTGGCTCT TTTTTATTAA TGGTTATGCT AAGTCAAATG 
TCTGTAGAAA CATATAGAGG AAGAGAATTA ACCTTTAATG TTCCTACAAA GAATAAAATA 
ATATTTTTGA TTTCAGGATT GCCAGGAGTT ATAGGGACAT TTCTCAGTTT TTACTATGGC 
TTTATTACAT TAAAATATAA TGGGCTAGGT TTTACTTCGG GAACCTTAAT ATTATCTTTG 
TTGATAATAG GGGTATATCT ATTGGGAATA GTTAATTTTC TTAAAATAAA AAATAATTAT 
TGGGGTTAG
 
Protein sequence
MKLERKNSGI IFLIFGVVFV LNALNPVMEL LYIKAKGEIA EAKIVAYDFI QRSSRSGRGS 
SYKYIPIIEF FDGKEIVQVP VTMNSLNEEL DIIGLDVKVS YLKNTPSKVI IDDKLFWLYE 
ISNSLVVVGS FLLMVMLSQM SVETYRGREL TFNVPTKNKI IFLISGLPGV IGTFLSFYYG 
FITLKYNGLG FTSGTLILSL LIIGVYLLGI VNFLKIKNNY WG