Gene CPF_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1147 
Symbol 
ID4202792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1310920 
End bp1311867 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content25% 
IMG OID638082028 
Producthypothetical protein 
Protein accessionYP_695593 
Protein GI110800887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000856874 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAATAA TCGATATTAT ATTAAGCATA ACTATATTGA TTAGTAGTGC AGTTAATACA 
ATTATTGGCA AAGATAATAA ACTAATGAAC TATTCAGAAG ATAAGTTAAA TGAATTAGAA
ATATATAATT CTGCTAGTTT AGAAAAATTT ATTTTAGAAA GAAATTTTGA AAGTTTATTA
GATAAATCTA ATAAAGAATT TAGCCATAAT ATTGAGCAAG ACTTAATAGA TAATAGTTCA
AATGTGGAAG AAGATAATTC ATATCCAGAG ACTAATAGAT TTAATAGAGA AAATAATTTA
AAGGATTCTG TTATTAGAGA TGGATATGGT GCTTACATTG AAGATGGTTA CATAAAATTT
GGAGAAAAAA ATAAGAGCTT AAGAATTTTT ACTAAAGGTA ATTATGAAAA TGATGGAGCT
AAATTAGATT TAGATGTCAA TGATTATGAT GATACTAGAG AGCTTGAAAA TACTTATGGT
TATTTAGTTG GAGAACAACC AATTAGTCTA GGTGGTTTAG ATAGTCGTTA TTACTTTGAA
ACGGCAATAA TAAAAGGGGT GATGGTTGAA TATCCTAATA TAGTTGTTTT AGATAAAAAC
TATCAATTAG ATGATAAATC GGCACTTTCT TTTAAGAGTA AGGATGGACT AATCGAGTTT
TCTTTAGTTA ACCTTAAAAA TTATAATGAT GATGACAGTA AGTTTTTTTA TAAAAAAGAA
ACTAGCTATG GAGAGGTATT AGAATCTATG TGTGGTGATG ATTGGTTTTA CTCATATACT
AAAAAAAATG GTGAGATTAT ATATAGTTTA AAAGTTTTAG ATGGAGATAG ATTAAAAGGA
TTTTCTTATA AGTTTCCAGT TCAATATAAA GATGAATTTA AGCCTATTAT AGAACGAAGT
AGAAAAACCT TTGAAATGTT TAATGGTTTT CCAAAGAGTA TAAATTAA
 
Protein sequence
MRIIDIILSI TILISSAVNT IIGKDNKLMN YSEDKLNELE IYNSASLEKF ILERNFESLL 
DKSNKEFSHN IEQDLIDNSS NVEEDNSYPE TNRFNRENNL KDSVIRDGYG AYIEDGYIKF
GEKNKSLRIF TKGNYENDGA KLDLDVNDYD DTRELENTYG YLVGEQPISL GGLDSRYYFE
TAIIKGVMVE YPNIVVLDKN YQLDDKSALS FKSKDGLIEF SLVNLKNYND DDSKFFYKKE
TSYGEVLESM CGDDWFYSYT KKNGEIIYSL KVLDGDRLKG FSYKFPVQYK DEFKPIIERS
RKTFEMFNGF PKSIN