| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1140 |
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| Symbol | |
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| ID | 4203184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1301654 |
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| End bp | 1302910 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638082021 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_695586 |
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| Protein GI | 110799522 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00613378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAA AAGATATATT CTTTAAAACA AAGAGAAGTG TAACTTTAAT TAGTGCAGGA
ATAGTTTTTT TCTGCCTTTT AATATTTGCA ATTATAACCA CAACATTATA TACATCTAGA
GTATTTGTAA ATGTTGATAA TAGTTTACTT CAAGAGAAAG AAAAGGTTCA AAAAGTATTA
ATTCCTAATC CGCAGGATAG ACAATTTTTT GAAATTGGTA AAAATGTTTT ACCTCCTACT
CCTCCTAATA TTATAGCTAT TTTATATAGA GGAGATAGGG TTTTATCAAT GAATCCTAAT
CCCTATTTTG ATGAAGATAA TTTACCAGAT TTAGGGGAAG AATCTAAGAG TAAGGTAGAA
CAAATAACCT TTAAAGGTTA TAAGTTTAGA GGAGTTACCA TATCAAGTAG AGATATAAGA
GTACAATTAC TTATGAATAT TGATTCTGAA GTTCAATCAA TAAACCAATT AATAAAAACC
ATAATAATGG CTTTAGTAAT ATTAATAGGA ATTGCATTAG TTTTATCATA TATTCTTTCT
TCAAAGGTAA TAAAGCCTAT AAAGAAAGCT TATGATAAAC AAGTATTTTT CGTTCAAGAT
GCATCCCATG AGATGAAAAC ACCTTTAGCT GTTATAAAAG GCAAATTAGA GCTTTTAGCA
AATTCTTGGG ACGATAAAAT AGAAGATCAT TTTGAACATA TTTCTAAAAT GATGAGTGAA
GTTAGAGATC TTGAAAAGCT AAATAGTGAC TTATTATTAT TATCAAAGGA AGATATAGAT
AATAGCGTAA ATATAGTATC CTTTGAGCTA GAGGAGTTCA TAGAAGATTT AAGTGAGTTT
TATGTTGATT TAGCAGAAGT ACAGGAAAAG AATTTTATTG TAAATAGACC TCTTACTCCT
GTAATAGTAA AGTGGGATTA TAGTAAGGTA AAAAGAATGC TTATAATACT TCTTGAAAAT
GCATTTAAAT ATACAGAAGA GGGTGGTAAG ATAAGCCTAT CTTTTGAAGA AGTAAATAAA
AATATAAAGA TAATAGTTTG TGATAATGGT ATAGGAATTA AAGAAGAGGA TATAGGACGT
ATTTTTGATA GATTTTTTAG AAGCGCAGAT GTTAGAGGAA AGAATATTAA GGGTAGTGGA
ATTGGATTAA GTTTATTAAA ATCTATTGGC AAGACCTTAG GAACAGATAT AAAGTTATAT
TCAAAATATG GTATAGGAAC AAAATTTGAA ATTACAATAC CTAAAATATT AAATTAA
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| Protein sequence | MKRKDIFFKT KRSVTLISAG IVFFCLLIFA IITTTLYTSR VFVNVDNSLL QEKEKVQKVL
IPNPQDRQFF EIGKNVLPPT PPNIIAILYR GDRVLSMNPN PYFDEDNLPD LGEESKSKVE
QITFKGYKFR GVTISSRDIR VQLLMNIDSE VQSINQLIKT IIMALVILIG IALVLSYILS
SKVIKPIKKA YDKQVFFVQD ASHEMKTPLA VIKGKLELLA NSWDDKIEDH FEHISKMMSE
VRDLEKLNSD LLLLSKEDID NSVNIVSFEL EEFIEDLSEF YVDLAEVQEK NFIVNRPLTP
VIVKWDYSKV KRMLIILLEN AFKYTEEGGK ISLSFEEVNK NIKIIVCDNG IGIKEEDIGR
IFDRFFRSAD VRGKNIKGSG IGLSLLKSIG KTLGTDIKLY SKYGIGTKFE ITIPKILN
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