| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1117 |
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| Symbol | |
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| ID | 4202661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1274949 |
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| End bp | 1277291 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081998 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_695563 |
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| Protein GI | 110799795 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.158926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATT ATAGAGAGCC TATTTATAAA ATAGAGCCTT GGAATATAAC AGAAGAAGAA
TTTCTTTTAA AAAATAATTA TAGAAATGAA ACAACATTTT CATTGGCTAA TGGATATATA
GGTACTAGAG GCACCTTTGA AGAGGAATAT GATTTTGATG TTGAAACAGG ATTAGAAGGA
AACTTTGTAA ATGGCTTTTA TGAAAGTGAG CATATAAGAT ATGGGGAATG GAATTTTGGT
TTCCCTACAG AAAGTCAATC ACTTTTAAAT CTTCCAAATG CTAAAATAAT AAAGCTATTT
ATAGAAGATG AAGAATTCAG TATGCTTACA GGTGAAATAG AAGATTATAA GAGAGTTTTG
CATATGAAAG AGGGAAGGAT AACTCGAGAT CTTATATGGG TATCACCTAA GGGTAAAAAA
ATAAAAATTA GCATAAGTAG ATTTGTTAGT TTTAATAATA AAAATTTAAT GGAAATACGT
TATAAAGTTA CTCCTTTAAA CTTTAGTGGA AATTTAAAAT TTATCTCTGC TATTGATGCA
AATGTAGAAA ATCATACAAG AAAAACTAAT CCTTTAGTTG ATTATGGTCC TTTTGGTAAA
AGGCTTGCAA ATGATTATAT AGATTCCATA AAAGATGAAC TTTATTATGA AGGAACAACA
TTAAATAGTG AACTTTCAAT AGCTTGTGGA GCAGTAAATA AAATATCAGC AGAAAACTTT
ATAAGAAAGA ATTTTAAAAA TTATGAGCTT TTTGGGGTAT CTTATGAATT TTATGCTAAG
GAAAATAAAG AAATTATATT AGATAAGTTT ATTGCATATA GCACATCTTT AGATATGAAT
TGTAAAAAGT TACATGGCTT TATAAAAACT ATTTTAAGTG ATGCCAAGAA AAAAGGATAT
ATAGAAGCTG AGAGAGAGCA AAAGGAATAT GTTGAAGAAT TTTGGAGAAC AGCTGATGTA
ATTATTGAGG GAGATGATGC ACTTCAACAG GGAATAAGAT TTAATCTTTT TCACCTTATG
CAATCAGCTG GGAGAGATGG TAAAACCGGA ATGGGAGCTA AAGGGTTAAG TGGAGAAGGA
TATGAGGGAC ATTATTTTTG GGATACAGAA ATGTATGTAC TTCCTGTATT TGTATATACT
AAGCCAGATT TAGCTAAGAA ATTACTAGAT TATAGGTATT TTACTTTAGA TAAAGCTAGA
GAGAGAGCAA GGGTATTAGG ACATGATAAA GGAGCCTTAT ATCCATGGAG AACAATTAAT
GGAGAGGAAG CATCAACATA TTTTCCTTTA GGAACGGCTC AATATCATAT AAATGCAGAC
ATAGCATATG CCTTTAAGCT TTACGTAGAT GTTAATGATG ATTTTCACTA TTTAAAGGAT
AAAGCAGCTG AGGTTTTATG TGAAACTGCA AGGGTTTGGG CTGATGTAGG ATCATTTTCT
GAGTATGTAG GAAATAAATA TTGTATTTGT GCTGTAACTG GGCCAGATGA GTACAATGCT
ATAGTTGATA ATAATTTTTA CACTAATCTT ATGGCCCGTG AAAACCTTAG AGATGCAATA
TGGGCATTAA ATAAGATTAA AGAAAAAGAT CAATTAGCTT ATGATAATTT GGTTAAAAAG
ATTGATTTAA AAGATGAAGA AATAGAATAT TGGAAAAAAA TAATTGAAAA TATGTATTTC
CCGTATGATG AGAAAAGAGG GGTGTATCCT TTAGATGATG GCTTTATGAA GAGGAAGCAT
TGGGATGATT CAAAAATACC TAAAGAAAAG AGACATCTTC TTTATGAAAA TTATCATCCT
CTATTTATAT TTAGACAAAG GATGTCAAAG CAAGCTGATG CAATTTTAGC AATGTACCTT
CATAGTAATC TTTTTAGTAT AGAGGAATTA AGAAAAAACT ATGATTTCTA TCAAGAAGTA
ACATTGCATC ATTCCTCTTT ATCAACTTGT ATATTTGGTA TTTTAGCTAG TCAAATTGGA
TATGATGAGG AGGCTTACAA GTATTTTTCA CAGTCAGCAA GAATGGACTT AGATGATTAT
CACAATAACT TTTATGCTGG AATTCATGCT GCAAATATGG CAGGAACCTG GCAAGGCATT
GTAAATGGTT TTGCAGGACT TAGAACTAAT AAAGGAATTT TAGAATTAAA TCCTACAATA
CCTAAGGAGT GGAATGCATA TAGTTTTAAA ATTTTCTATA AGAAGAATCT ATTAGAAATA
AAAATTTCTA AAGATGAAAT TGAAATAAGA CTATTAGAGG GCGAGAATTT AGAATTATAT
GTATATGGAG AAAAAGTTTA TCTTAAAAAT TTAAGTGAAA TAATAAAAAT ACCAGCTAAA
TAA
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| Protein sequence | MEDYREPIYK IEPWNITEEE FLLKNNYRNE TTFSLANGYI GTRGTFEEEY DFDVETGLEG
NFVNGFYESE HIRYGEWNFG FPTESQSLLN LPNAKIIKLF IEDEEFSMLT GEIEDYKRVL
HMKEGRITRD LIWVSPKGKK IKISISRFVS FNNKNLMEIR YKVTPLNFSG NLKFISAIDA
NVENHTRKTN PLVDYGPFGK RLANDYIDSI KDELYYEGTT LNSELSIACG AVNKISAENF
IRKNFKNYEL FGVSYEFYAK ENKEIILDKF IAYSTSLDMN CKKLHGFIKT ILSDAKKKGY
IEAEREQKEY VEEFWRTADV IIEGDDALQQ GIRFNLFHLM QSAGRDGKTG MGAKGLSGEG
YEGHYFWDTE MYVLPVFVYT KPDLAKKLLD YRYFTLDKAR ERARVLGHDK GALYPWRTIN
GEEASTYFPL GTAQYHINAD IAYAFKLYVD VNDDFHYLKD KAAEVLCETA RVWADVGSFS
EYVGNKYCIC AVTGPDEYNA IVDNNFYTNL MARENLRDAI WALNKIKEKD QLAYDNLVKK
IDLKDEEIEY WKKIIENMYF PYDEKRGVYP LDDGFMKRKH WDDSKIPKEK RHLLYENYHP
LFIFRQRMSK QADAILAMYL HSNLFSIEEL RKNYDFYQEV TLHHSSLSTC IFGILASQIG
YDEEAYKYFS QSARMDLDDY HNNFYAGIHA ANMAGTWQGI VNGFAGLRTN KGILELNPTI
PKEWNAYSFK IFYKKNLLEI KISKDEIEIR LLEGENLELY VYGEKVYLKN LSEIIKIPAK
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