Gene CPF_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1105 
Symbol 
ID4201935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1262167 
End bp1262631 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content27% 
IMG OID638081986 
Producthypothetical protein 
Protein accessionYP_695551 
Protein GI110801023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGAA TTAAAAAATT TACTCCAAGA GTTAGTAAGA GAATTTTACT TTTTATAGCA 
GGATTAGTAT GGGGATTTGC AGGATTTAGA GTATTTACTT TAGGGTTTGG AGATGTTATG
TCACATCACG GAAACTTAAT CATAACAATC ATTTTTGCAG CAGTTATATT TTTTGTGTTT
TTTAAATTTA TATTTAGTAA AATGTTTAAG AAACATACAA CAAGAATAGT AAATAGTAAA
CTTGATAAAC ATTGTGTATT TTCCTTCTTT GATTTTAAGA GTTATCTTAT AATGGGATTT
ATGATTTTCT TTGGAATTTC AGTTAGAAAC TTAGGAATAT TTAATCCAGT TTATTTAGGC
GATTTTTATA TGGGATTAGG AGCAGCACTA TTTATGGCTG GCGTATATTT CTTTGTAGGA
TTCTTCACCT TTGATAATTT AAAAGTAAAA TATAAAATTA GCTAA
 
Protein sequence
MDGIKKFTPR VSKRILLFIA GLVWGFAGFR VFTLGFGDVM SHHGNLIITI IFAAVIFFVF 
FKFIFSKMFK KHTTRIVNSK LDKHCVFSFF DFKSYLIMGF MIFFGISVRN LGIFNPVYLG
DFYMGLGAAL FMAGVYFFVG FFTFDNLKVK YKIS