Gene CPF_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1088 
Symbol 
ID4203001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1245204 
End bp1245383 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content27% 
IMG OID638081969 
Producthypothetical protein 
Protein accessionYP_695534 
Protein GI110799879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.179877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCTA AGAAAGAAAA AAGATTTGAA AATAAGTTTA TAGAAAACTT AGATTTTGGA 
ACAATAATTG TCTTAGTGGA TAAAAAAACT GGAGTAAATT ATCTTTTAGC TCAAGGTCTA
AATGGCTGCA GTTTAACCCC TTTACTAGAT TCTAAAGGAA ATGTAGTTGT GGAAAAATAA
 
Protein sequence
MFSKKEKRFE NKFIENLDFG TIIVLVDKKT GVNYLLAQGL NGCSLTPLLD SKGNVVVEK