| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1070 |
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| Symbol | |
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| ID | 4200945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1215484 |
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| End bp | 1216935 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638081951 |
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| Product | PTS system, N-acetylglucosamine-specific IIBC component |
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| Protein accession | YP_695516 |
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| Protein GI | 110798745 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.121451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAAT ATTTTCAGAA ATTAGGTAAA TCTTTAATGC TACCAGTTGC TGCACTTCCA
GTAGCAGGCA TATTAATGGG AATTGGATAT TGGCTAGACC CATCTGGATG GGGTGCTAAT
AGTGTAGTAT CAGCATTCTT ATTAAAATCT GGTGGAGCTA TTATAGATAA CATGGCAATC
TTATTTGCTA TTGGGGTAGC TGTTGGTATG TCAGATGATA ATGATGGAGC AGCAGGTTTA
GCAGGTTTAG TATCATGGCT TATGATAACT ACATTATTAT CTAGTGCAGT TGTTGCAATG
ATGCAAGGAG TAGATGTTGA AGCTGTTAAC CCAGCCTTTG GAAAGATACA AAACCAATTT
ATAGGTATCG TAGCCGGTTT AATAGGAGCT GGTTGTTATA ATAGGTTTAA AAATACTAAA
TTACCAGATT TCTTAGGATT CTTTAGTGGA AGAAGATGTG TTGCTATAGT AACAGCACTT
GCTTCAATAG TAGCTTCTTT AGTTTTATAC TTTGTATATC CTGTAATATA TAGCGCATTA
GTTTCATTTG GTGAATCAAT AATAGCTATG GGACCAATAG GAGCTGGTGT TTATGGATTC
TTCAATAGAT TATTAATACC ACTTGGTTTA CACCATGCTT TAAACTCAGT ATTCTGGTTT
GACGTTGCTG GTATAAATGA TATAGGAAAC TTCTGGGCTG GAACAGGTAC TTTAGGACAA
ACTGGTATGT ATATGTCAGG TTTCTTCCCA GTAATGATGT TTGGTTTACC TGCTGCTGCT
TTTGCAATGT ATCGTTGTGC AAAAACTAAT AAAAAGAAGG CTGCTGCTGG TATATTATTA
GCTGCTGCTT TATCATCATT CGTTACAGGA GTAACTGAAC CATTAGAATT TGCATTCATG
TTCTTAGCAC CTGCTTTATA TGTAGCTCAT GCTTTATTAA CAGGAATATC TATGGCAGTT
GTTGCTGCTT TACCAGTAAG AGCAGGATTT AACTTTAGTG CTGGTTTAGT AGACTGGATA
TTAAGTTTTG CATCACCAAT GGCATTAAAC CCATTATACT TATTAGGTAT AGGTTTAGTA
GTGGGAGTTA TATACTACTT AGTATTCGTA GTTATGATAA AGAAATTTGA CTTAAAGACT
CCAGGTAGAG AAGATGATGA GGATGATGAT TCAAATGCAG TTTTAGCAAA TAATAACTAC
ACTGAAGTTG CAAAAATCAT CTTAGAAGGA CTAGGTGGAC CTTCTAATAT TACTTCAATT
GATAACTGTA TAACTAGATT AAGATTAGAA GTAAAAGACA GCACACTAGT TAATGAGAAA
AAGATAAAAT CATCTGGTGT TTCAGGAGTT ATAAGACCTG GAAAAACAAG TGTTCAAGTT
ATAGTTGGAA CACAAGTACA ATTCGTAGCT GACGAGTTTA AGAAACTTTG TAAGTCTAAA
AATTACGTAT AA
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| Protein sequence | MMKYFQKLGK SLMLPVAALP VAGILMGIGY WLDPSGWGAN SVVSAFLLKS GGAIIDNMAI
LFAIGVAVGM SDDNDGAAGL AGLVSWLMIT TLLSSAVVAM MQGVDVEAVN PAFGKIQNQF
IGIVAGLIGA GCYNRFKNTK LPDFLGFFSG RRCVAIVTAL ASIVASLVLY FVYPVIYSAL
VSFGESIIAM GPIGAGVYGF FNRLLIPLGL HHALNSVFWF DVAGINDIGN FWAGTGTLGQ
TGMYMSGFFP VMMFGLPAAA FAMYRCAKTN KKKAAAGILL AAALSSFVTG VTEPLEFAFM
FLAPALYVAH ALLTGISMAV VAALPVRAGF NFSAGLVDWI LSFASPMALN PLYLLGIGLV
VGVIYYLVFV VMIKKFDLKT PGREDDEDDD SNAVLANNNY TEVAKIILEG LGGPSNITSI
DNCITRLRLE VKDSTLVNEK KIKSSGVSGV IRPGKTSVQV IVGTQVQFVA DEFKKLCKSK
NYV
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