Gene CPF_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1065 
Symbol 
ID4203603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1212579 
End bp1212926 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content27% 
IMG OID638081946 
Producthypothetical protein 
Protein accessionYP_695511 
Protein GI110800921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00199438 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATTG GAAGAGTAAG AGAGGATGCT AATGATGCCT TTGAAAGCTT AATTGGATTT 
GAATTTATTT TATTAGATTT AAAGATTAAA GATAAATTTA TGGTACTAAA TCCTTTGACA
ACAGAGGGCT TTGAAAAGTT TTATTATGAG ATTTTTAAAA GGTTTGGGAA AGATGTAATC
AATAAAAAAT ATAAAGATTT CTTAAAATAT ATGATGAGTG AAGAGTGTGG GTTTGATATT
TGCTCAGATA TAGACAACTT TAAGAATCTA AGAGATTTTA CTGATGATGA TAAGAAAAAT
TATAATTTTG CTCTAGAAAA CTTCAAGGGT AAATATGGTT TGCAATAA
 
Protein sequence
MKIGRVREDA NDAFESLIGF EFILLDLKIK DKFMVLNPLT TEGFEKFYYE IFKRFGKDVI 
NKKYKDFLKY MMSEECGFDI CSDIDNFKNL RDFTDDDKKN YNFALENFKG KYGLQ