| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1059 |
|---|
| Symbol | |
|---|
| ID | 4203685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1207726 |
|---|
| End bp | 1208283 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 638081940 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_695505 |
|---|
| Protein GI | 110799807 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0205734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATTG AGAATAATAA TATTATTAAA AGTATAAATT TGAAAGATAG TAAAAACTTA
ATATTGAGAA AACCACTAGA ATATGATGCC GAAAACATAA TTAAGTACCT TAATACTGTA
GGTAGTGAAA GTAATAATTT ACTTTTTGGT AAAGGAGAAT TTCCACTTAC AGTAGAACAG
GAAAAAGCTT ATATTAGTAG AATAAATCAA AGTTCCAATT CATTTATGGT TCTAGGAACT
ATTAATAATG AAATTGTAAG TGTTGCGCAA CTAAGTTCAC CTAATATGAA AAGAATATCC
CACAATAGCG AAATGGCAAT CTCTGTAAAA AAAGATTATT GGAACATTGG AATTGGAAGT
GCTGTCATGG AGGCACTTAT AAAATTTGCT AAAGATAAAG GATCAATCAA AACTATCAGT
CTTGGAGTTA GAGAATATAA TATTAATGCT ATTAAACTGT ATGAAAAATA TGGATTTAAG
AAAATAGGAA CTCATAAAAA TTACTTTAAC ATTGAAGAGA CTTATTATGA TGAAATCTTA
ATGGATTTAT ATATATAA
|
|---|
| Protein sequence | MGIENNNIIK SINLKDSKNL ILRKPLEYDA ENIIKYLNTV GSESNNLLFG KGEFPLTVEQ
EKAYISRINQ SSNSFMVLGT INNEIVSVAQ LSSPNMKRIS HNSEMAISVK KDYWNIGIGS
AVMEALIKFA KDKGSIKTIS LGVREYNINA IKLYEKYGFK KIGTHKNYFN IEETYYDEIL
MDLYI
|
|---|
| |