| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1057 |
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| Symbol | |
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| ID | 4203689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1205257 |
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| End bp | 1206513 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081938 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_695503 |
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| Protein GI | 110799811 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.197208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA AGAATAAACC TAAAAATGTT ACCTCTATTG CAATAAAGAT TAATGCTATT
TCTGTTAGAG ATTTATTTTT TAGATTTTTA GCAATTGACA TATGTTTAAT AATTATTTTA
ATTATTCTTT GGTGTATTCA AGCTGAAAAA GATTTCTATG GAGAATTAGT AAAAAATGCA
CAAAGGTCAT TTAACTTTTT CCCTATAGAA AATTCAACCT ATACAGTTGT TTGGAGTAAT
GGAAAGACCA TGGTTAAAGA AGCTGGTGCT TTTTTATATT ATGTTAGAAA AATAGTTATA
ATTTTAGGAA TAGTAGAAGG AGTATTTTTA TTAGAAGAAA TAATATTTGG TACAGCTAAA
ATTAGAAAGA CCTTAAAACC ACTTAATGAA ATAGCAGAAA CAGCAAGTAG GCTTAGTAAT
ATGGACTTTG ATGAGGAAAA ATTTCAAAGT CTTGAAGATG CTATTTCCAA AATAAGTCCT
GTAACATCTG ACGAAAGAAT ACATATAGGT GATAGCGAAC TTAAAGGATT AGAGGATGCA
ATAAACAAGC TTTTAGACAG GATGAGGGAT TCTTATAGGC AACAAGCAAG GTTTGTATCA
GATGCATCTC ATGAACTTAG AACTCCTATT TCTGTAATTC AAGGATATGC TAATATGCTA
GATCGATGGG GGAAAAATGA TGAGAGCGTA TTAGAAGAGT CTATTATAGC AATAAAGAGT
GAATCTGAAA ATATGAAAAA TCTAGTTGAG CAGCTATTAT TCTTAGCTAG AGGTATTAAT
GGAAAGACTA AGCTTACAAT AAAGGAATTT TCTTTAAATA ATATGATAGA TGAAGTTTTT
GAAGAGTCTA AGATGATAGA TAAGAATCAT GTATATAACT ACATTGAATC AGAACATATA
ACTGTTCAGG GTGATATGGC TTTGCTTAAA CAAACAGCTA GAATACTAGT TGAAAATGCA
ACTAAATATA CAGAAGAGGG AGAAATAATA ACGCTTAAAG TAGGTGAGAA TTCTAAAGGA
GAAGCTTATT TTTCAATTCA AGACAATGGA ATTGGCATGG ATGAGAATGA TGTGCCTCAT
ATATTTGAAC GTTTTTTTAG GGCTGATACA GCAAGAGTTA GAAAAAATGG TGGAACAGGG
CTTGGGCTTT CTATAGCAAA GTGGATAATT GATAACCACA AAGGGTACTT TAGTGTTTTA
AGTAGAAAAG GAATAGGAAC AAGAATAACT GTTTACTTAC CACAAAATAT TAAGTAG
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| Protein sequence | MSKKNKPKNV TSIAIKINAI SVRDLFFRFL AIDICLIIIL IILWCIQAEK DFYGELVKNA
QRSFNFFPIE NSTYTVVWSN GKTMVKEAGA FLYYVRKIVI ILGIVEGVFL LEEIIFGTAK
IRKTLKPLNE IAETASRLSN MDFDEEKFQS LEDAISKISP VTSDERIHIG DSELKGLEDA
INKLLDRMRD SYRQQARFVS DASHELRTPI SVIQGYANML DRWGKNDESV LEESIIAIKS
ESENMKNLVE QLLFLARGIN GKTKLTIKEF SLNNMIDEVF EESKMIDKNH VYNYIESEHI
TVQGDMALLK QTARILVENA TKYTEEGEII TLKVGENSKG EAYFSIQDNG IGMDENDVPH
IFERFFRADT ARVRKNGGTG LGLSIAKWII DNHKGYFSVL SRKGIGTRIT VYLPQNIK
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