Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1051 |
Symbol | fucA |
ID | 4202743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1199318 |
End bp | 1200022 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638081932 |
Product | L-fuculose phosphate aldolase |
Protein accession | YP_695497 |
Protein GI | 110798616 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.698084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGAATA CAAATAAATT AAAATACATG GAAATAAGAG AACAGATATG TGATGTGTGC CATAAAATGT GGCAATTAGG ATGGGTGGCA GCAAATGATG GAAATGTATC AGTGAAATTA GAGGATGGTA CATTTTTAGC TACACCAACT GGAATTAGTA AAAGCTTTAT AACACCAGAA AAATTAGTTC ATATTGATGA AAATGGAGAA GTACTTGATG GACCAGAAGG AGCAAAGCCT TCATCAGAAA TAAAAATGCA TTTAAGATGC TATAAGGAAA GAGAAGATGT TGGAGCAGTT GTTCATGCAC ATCCACCAAC TGCTACAGGA TTTGCAGTTG CTCATCTTGC TTTAGATAGA TATACAATGA TAGAAACTGT AATTGCAATT GGATCAATTC CAATAGCTCC TTATGGAACT CCTTCAACTT ATGAAGTTCC AGATTCAATA GCGCCATATC TTCAAGAACA TGATGTTATA TTATTAGAAA ATCATGGAGC ATTAACAGTT GGAGCAGATT TAATAACTGC TTACTATAGA ATGGAAACAT TAGAATTATA TGCAAAAATA AGTTTAACAG CTCATCTTTT AGGTGGAGAA AAGGAAATAG AAAGAAAAAA TATTGATAGA TTAATAAATA TGAGAAAAGA TTATGGAGTA AGTGGAAAAC ATCCAGGGTT TAAGCGTTAT AGAACAGAGG AATAA
|
Protein sequence | MENTNKLKYM EIREQICDVC HKMWQLGWVA ANDGNVSVKL EDGTFLATPT GISKSFITPE KLVHIDENGE VLDGPEGAKP SSEIKMHLRC YKEREDVGAV VHAHPPTATG FAVAHLALDR YTMIETVIAI GSIPIAPYGT PSTYEVPDSI APYLQEHDVI LLENHGALTV GADLITAYYR METLELYAKI SLTAHLLGGE KEIERKNIDR LINMRKDYGV SGKHPGFKRY RTEE
|
| |