Gene CPF_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1043 
Symbol 
ID4201208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1191279 
End bp1191758 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content31% 
IMG OID638081924 
ProductNUDIX family hydrolase 
Protein accessionYP_695489 
Protein GI110799724 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATATG ATTGTGGTTT TGTAAAGGAA AGTAACTGGT TTCGTTATCG TGCTGGTGCA 
ATTATTATTG AAGATGGAGC TGTTCTTTTC GCTAGTAATG AAAGGGAAGA TTACTACTAT
TCTATTGGTG GTGGAGTACA TATGGGAGAA TCAGCTGAAG AAGCTGTAAA GCGTGAAGTC
TTTGAAGAAA CAGGAGTTGA ATATGAAGTT GATAGATTGG TATTTATACA TGAAAACTTC
TTTAAAGGTG ATGGAAGTTT GGAAGGTAAA AACTGTCATG AAATATGTTT TTATTTTTTA
ATGAAACCTA GAGGAACACG TAATTTAAAT AGTAATAGCT ATACTAGTGA AGTTAAGGAA
ATAATGTATT GGATTCCAAT AGAAGAACTA AGTAATTATC GCGCTTATCC TACATTCTTT
AGAGAAAAGT TAACTAATCT TAAGAATGAG ATTGAACACA TAGTAACTTA TGAATATTAA
 
Protein sequence
MEYDCGFVKE SNWFRYRAGA IIIEDGAVLF ASNEREDYYY SIGGGVHMGE SAEEAVKREV 
FEETGVEYEV DRLVFIHENF FKGDGSLEGK NCHEICFYFL MKPRGTRNLN SNSYTSEVKE
IMYWIPIEEL SNYRAYPTFF REKLTNLKNE IEHIVTYEY