Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1040 |
Symbol | |
ID | 4201632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1188620 |
End bp | 1189324 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638081921 |
Product | hypothetical protein |
Protein accession | YP_695486 |
Protein GI | 110801131 |
COG category | [S] Function unknown |
COG ID | [COG3382] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0178906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TTATTATTGA GGATGATTTT TGGGAGCTAT TCCCTAATGC AAAGATAGGT ATTATCACTT GCAATGGCAT AGATAATACT ATAAAAGATG AGAACCAATA CAAGGACATG ATTTCTCAAG GAGAAAAGGA AGCTTTAACT CACTTGCCTA ATGAAGAATT TAGCAGCAAT GAAGTTATTA AGGTATGGAG AGATGCATTT AAGAAGTTTA AGACTAAAAA AGGAGCAAGG TCATCAATTG AAGCTTTATT AAAGAGAGTT TCTACTGGTA AAGGATTAGG AACAATTAAC CCACTAGTTG ATATTTATAA CTCTATATCA TTAAAGTATG CCATGCCTTG TGGTGGAGAG AATATGGATA AGTTTATTGG AGATATAAGA TTAACTAAGG CAACAGGAGA TGAAAGTTTT ATTACCTTAG GATCAGATAA AAGTGAGCCA CCCTATGAGG GAGAATTAGT TTATAAAGAT GATGAAGGAG CTATTTGCAG ATGCTGGAAT TGGCGTGAAT CAGTAAGAAC TATGTTAACA GAAGATACAA AAAATGCTTT CTTATGCATT GAGTTAGTTG ATGAAAATAG AGAAAAAGAT TTTGAAAATG CCTTAAAAGA GTTATCTCAA TTAGTAGAGG AAAACTTAGG TGGAAAATCT GAGATTTCAA TACTTCATAT TAATAATAAG GAAGCTATAA TTTAA
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Protein sequence | MKKFIIEDDF WELFPNAKIG IITCNGIDNT IKDENQYKDM ISQGEKEALT HLPNEEFSSN EVIKVWRDAF KKFKTKKGAR SSIEALLKRV STGKGLGTIN PLVDIYNSIS LKYAMPCGGE NMDKFIGDIR LTKATGDESF ITLGSDKSEP PYEGELVYKD DEGAICRCWN WRESVRTMLT EDTKNAFLCI ELVDENREKD FENALKELSQ LVEENLGGKS EISILHINNK EAII
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