| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1028 |
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| Symbol | |
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| ID | 4201164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1179642 |
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| End bp | 1180868 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638081909 |
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| Product | multidrug resistance protein |
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| Protein accession | YP_695474 |
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| Protein GI | 110799410 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0302699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAT TTAAATCATA TAATAAAGAA AAAAATGAAG AAACATTGGA TAAGAAGGCT
TTCATCTTTG GTCTTATGTC TGTATTTCTT TGTGGAATGG GCTTTAGTAT TATATCCCCT
GTTGTTCCAT TTTTAGTGGA GCCTTATGTA AGCAATACTA GTGAACAAGC TTTCTTCGTT
ACTCTACTAA CCTCAGTTTA TGCAGTTTGT GTATTTTTTG TAGCTCCTGG ACTTGGTGCT
TTAAGTGATA GATATGGACG TCGCCCCATA CTTTTAATAT GCCTTTTAGG TTCCTCAATT
GGATACTTAA TCTTTGGTAT AGGTGGCTCT ATATGGGTAC TATTTCTTGG ACGTATAATA
GATGGTGTAA CAGGTGGGAG CATAAGCACA ATTTTTGCAT ATTTTGCAGA TATAACTCCT
AAGGAAGAAA GGACTAAATA CTTTGGATGG ATAAGTGCAA GTGCAGGTAT AGGTGCTGCC
ATTGGCCCTA CTCTAGGTGG AGCGCTTGCC AAATTTGGCT ATGCTGTGCC AATGTATTTT
GGAGCAATAA TAACCTTATT AAACTTTATT TATGGAATCT TATATATGCC TGAAAGTCTT
CATGAAAATA ATAAGCTTAA GAAAATCACC CTTGTAAGAC TTAATCCATT TACACAGCTT
ATGAGTGTAC TTTCTATGAA AAACTTAAAA AGACTACTTA TTTCAGCCTT CTTAATTTGG
ATACCTAATG GATCTTTACA ATCAATTTTT TCACTATTTA CAATGGATAC TTTCAATTGG
ACACCTACAT TAATAGGACT TATGTTTTCA ATTATGGGTA TTCAAGATAT TATTTCACAG
GGCTTAATAA TGCCAAAGCT TTTAATGAAA CTTAGTGATG TAAAGATAGC AATCCTTGGA
ATGGTCTCTG AGATTATAGG ATATGCTCTT ATTGCAGCAT CAGCTATTTT CACATTCTAT
CCTTTTTTCA TAGTTGGCAT GTTTATATTT GGTTTTGGAG ATTCAATTTT TGGTCCCTCA
TTTAATGGAA TGCTCTCTAA GTCTGCTAAT TCTAGTGAAC AAGGAAGGAT TCAAGGAGGT
AGCCAAGCTC TTCAATCTCT AGCAAGAATA ATTGGCCCTA TTTTAGGAGG ACAAATCTAT
GTATCTCTAG GTCATTCCTC CCCTGCTTTT ACGGGTATGA TTCTAATAAT ATTGGCCATA
CCAATTTTGT ATAAGAGTAT TAGATAG
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| Protein sequence | MTKFKSYNKE KNEETLDKKA FIFGLMSVFL CGMGFSIISP VVPFLVEPYV SNTSEQAFFV
TLLTSVYAVC VFFVAPGLGA LSDRYGRRPI LLICLLGSSI GYLIFGIGGS IWVLFLGRII
DGVTGGSIST IFAYFADITP KEERTKYFGW ISASAGIGAA IGPTLGGALA KFGYAVPMYF
GAIITLLNFI YGILYMPESL HENNKLKKIT LVRLNPFTQL MSVLSMKNLK RLLISAFLIW
IPNGSLQSIF SLFTMDTFNW TPTLIGLMFS IMGIQDIISQ GLIMPKLLMK LSDVKIAILG
MVSEIIGYAL IAASAIFTFY PFFIVGMFIF GFGDSIFGPS FNGMLSKSAN SSEQGRIQGG
SQALQSLARI IGPILGGQIY VSLGHSSPAF TGMILIILAI PILYKSIR
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