Gene CPF_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1019 
Symbol 
ID4202480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1171434 
End bp1171916 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content26% 
IMG OID638081900 
Producthypothetical protein 
Protein accessionYP_695465 
Protein GI110798821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000271806 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTT TCAATGAGAG TAATTCAGCT AAATCTAAAA ATGGGAGTGA CTTAAACTCA 
TTAGTAAAAC AATTACTAAG TAAATCTTTA TCAGAAGGTT CTATCAAAAA ATTTGTGTAC
GAGCCTAGAT ATAATCATCC TGATACAACT TATCAACAAT TTAGTCCTGA TTTTGAAATC
GAATTAAATA ATGGTGAAAT TATAATTATT GATAATACTA CAACTGCTAG ACATGATAGA
TTTAAGCAAA AACAGTGGGA TGCTTATGGT GTGAAAGAAC ATTTTAAAGC TAAAAATAAA
AAAATTAATT ATTTTGTAGT ATTGCCAAAT AATGATTCTA TAGGTAATGA TACATCAAGA
GATAAGGAAA TAAGAAATGT TGAATTGGAA CAATCTAAAG TAAGAGGGAA AGAATATTTC
TCTATGATAG ATGATATTAT CCAATTAAAT GATTTAATAA GTCTTATCGA AAAAACAAAA
TAA
 
Protein sequence
MDLFNESNSA KSKNGSDLNS LVKQLLSKSL SEGSIKKFVY EPRYNHPDTT YQQFSPDFEI 
ELNNGEIIII DNTTTARHDR FKQKQWDAYG VKEHFKAKNK KINYFVVLPN NDSIGNDTSR
DKEIRNVELE QSKVRGKEYF SMIDDIIQLN DLISLIEKTK